Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq1 91.5 1e-13 >seq3 Length=2123196 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | | ||||| ||||||||| ||||||||| || ||||| ||||| Sbjct 1815513 ACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGA 1815572 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| | | || || ||||| || |||||||| || | | |||||| || | || Sbjct 1815573 CAAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGG 1815632 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || ||||||||| || || ||| || || | | || || ||||| Sbjct 1815633 GATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAAC 1815692 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || ||||| || ||||| || | |||||| ||||| || ||||| || Sbjct 1815693 CTCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTT 1815743 >seq1 Length=2451740 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | | ||||| ||||||||| ||||||||| || ||||| |||| Sbjct 160700 TACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAG 160641 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | || || ||||| || || ||||| || | | |||||| || | | Sbjct 160640 ACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 160581 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || ||||| || || ||| ||||| | | || || |||| Sbjct 160580 GAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAA 160521 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308 | || || ||||| || ||||| |||||||| || ||||| Sbjct 160520 CCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 160481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947171424817