Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 266 4e-66 seq4 181 1e-40 >seq5 Length=1517892 Score = 266 bits (294), Expect = 4e-66 Identities = 642/970 (66%), Gaps = 4/970 (0%) Strand=Plus/Minus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| ||||||| |||||||| || ||||| | | | | || | | |||||| Sbjct 776052 GCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCA 775993 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 || | || | |||||||| | || || || | ||||| |||||||||||| Sbjct 775992 CAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAA 775933 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 ||||| |||||||| |||||||| |||||||||||| |||| | || | ||||| | | Sbjct 775932 GCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATAC 775873 Query 62927 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTAT 62984 |||| | ||||||| | | ||| | || | |||| |||||| ||||| Sbjct 775872 CAGAGCTTTTGAGCCTTCACAGTC--TTTCTTCCTTTACCTTCTTGTTCGTACTTTGTAT 775815 Query 62985 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACA 63044 ||||| ||| || || || || | ||| ||| |||| | |||| ||| | | Sbjct 775814 ACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGA 775755 Query 63045 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63104 || | ||| || |||| | | || || ||||| || ||||| |||||||| | | Sbjct 775754 ATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGG 775695 Query 63105 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63164 || || | ||| | | ||| || || || || |||||| | | ||||| || Sbjct 775694 CTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGA 775635 Query 63165 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63224 | | | ||||| | ||||| || |||||||| | ||| | | || || | |||| Sbjct 775634 AATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGT 775575 Query 63225 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63284 | || || || || | |||||| || ||||||||| | || | | ||| ||||| | || Sbjct 775574 TACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAAC 775515 Query 63285 CATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63344 |||| || ||||| ||||| || | ||| ||| || | | ||||| ||| Sbjct 775514 CATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGT 775455 Query 63345 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 63404 | ||| || || || || | |||||||| || || ||| | || || || || |||| Sbjct 775454 GCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGA 775395 Query 63405 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63464 | || || || || ||| |||| || || ||||| ||||| || | | Sbjct 775394 TACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTG 775335 Query 63465 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGAT 63524 ||| || ||||| || || || ||||||||||| || || | |||||| | || | Sbjct 775334 GAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGT 775275 Query 63525 TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63584 |||| || ||||| | || | ||||| | || || || | || |||||||| | Sbjct 775274 TGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCATCA 775215 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 || |||||| || | || | | ||| ||| | | | | |||||||||| | |||| Sbjct 775214 CCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCA 775155 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704 | || || |||||||| |||||||| ||||||| ||||| | ||| | ||||| | Sbjct 775154 ATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCA 775095 Query 63705 GTTTATCCTT 63714 | |||||| Sbjct 775094 ACTCATCCTT 775085 Score = 89.7 bits (98), Expect = 7e-13 Identities = 318/489 (65%), Gaps = 15/489 (3%) Strand=Plus/Minus Query 61849 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 61908 |||||||||||| | ||| ||||||| || || | | |||||||| || || || | Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912 Query 61909 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT-GGAATAACT-CGGATCTGCT 61966 || |||| ||||| || ||||| ||| ||||| || | || |||| Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854 Query 61967 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62026 ||||| || |||| ||||||| ||| |||||| | || | | || |||||||| | Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794 Query 62027 ATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62085 || || |||||||| | |||||||| | || || || || || | ||| ||| ||| Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735 Query 62086 AAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62142 || ||||| || || ||||| || || | || || ||||| || | || Sbjct 776734 AATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCATTGCGTC 776675 Query 62143 ATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62199 || ||| | | | | || ||| | | || | | || || || | || || Sbjct 776674 ATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATCTGGAA 776618 Query 62200 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 62259 ||| || | | || | |||| ||| |||||| || || || || | | | || || Sbjct 776617 TTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACATTCGTT 776558 Query 62260 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319 | ||||| ||||||| || || ||||| ||||| ||||| ||||| | | ||||| Sbjct 776557 GTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCT 776498 Query 62320 AAGACCGTA 62328 | ||| || Sbjct 776497 CATACCATA 776489 >seq4 Length=1931745 Score = 181 bits (200), Expect = 1e-40 Identities = 402/592 (68%), Gaps = 17/592 (3%) Strand=Plus/Minus Query 62743 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62802 ||| || || || || ||||||||||| || | || | ||| ||| || | || Sbjct 969731 CAAAGCCACGGAAGCTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAAT 969672 Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862 ||| ||| || || | | ||||| ||||| || |||| ||| || ||||| ||||| Sbjct 969671 TTCACAGCATAGGTTTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTT 969612 Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922 ||| || ||||||||||| |||||||| ||||||||| | || |||| ||| || Sbjct 969611 ACAAGCGTCCTTATAAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGC 969552 Query 62923 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT---CTTTTCTCTTTCGTATA 62978 ||||||| | ||| | || || | | | || || | | || ||| | ||| Sbjct 969551 GTTCCAGA-GCCTCTGTGCTTTGACTGTT--TTCATAGCAAGGCCTTCCTCGGT-GTACT 969496 Query 62979 GTGTATACAATCGTTCGAACTCGTCTCCCCAAA---CATTGTCCAGTCCAGGACATTCAT 63035 |||||| | | ||| || ||||| | ||||| ||||| | || Sbjct 969495 TCTCATACAACCTCTTGAAGTCATCTCCATACGTCTCATTG---AGTCCTCTTGCCTGAT 969439 Query 63036 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63095 | ||| | | | ||| ||| | | ||| | |||| || |||||| |||||||| | Sbjct 969438 CAGGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTA 969379 Query 63096 TCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63154 |||| | || ||| || |||||||| | || ||||||| || || ||||| | Sbjct 969378 TCCACAAGGC-ATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGA 969320 Query 63155 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63214 ||||| |||||| | | | ||||| |||||| |||||||||||||| || | | || Sbjct 969319 AGATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCT 969260 Query 63215 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63274 |||| || || || || ||||| | || || || || || ||| | |||||||||||| Sbjct 969259 GGCCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATT 969200 Query 63275 GGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 |||| || |||||||| || ||||| || || | ||||||| ||| |||| Sbjct 969199 GGAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGATCC-CTGG 969149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631944557200