Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq6 201 1e-46
>seq6
Length=1261692
Score = 201 bits (222), Expect = 1e-46
Identities = 520/776 (67%), Gaps = 31/776 (4%)
Strand=Plus/Minus
Query 92921 AATCTATCAGCTACAAATTCTAT-GTACTGAGACATCAAATCACAATTCATTCCTA-GA- 92977
||||||||||| ||| | |||| ||| ||| ||||||| | ||| ||||| || | ||
Sbjct 58678 AATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGAG 58620
Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037
||||| | || ||||| || || ||| | ||| || || | || ||||| | | |
Sbjct 58619 AGACG--CTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATG 58562
Query 93038 ATTTCTATTACTCTACTATTT--GGTGGTTT-TTGTACGACATAATTGT---ACATTAAG 93091
||| || ||| || || | |||| | |||| | || | | | ||| ||
Sbjct 58561 ATT-CT----CTCAACAATCTCTGGTGCTGGCTTGTTCTTCA-AGTGGGCAAACAACAAA 58508
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| || || ||||| |||||||||||||| || | |||||||| || ||| || |||
Sbjct 58507 CAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAA 58448
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
||||| | || |||| ||||| | |||||| || || || || ||| || || ||
Sbjct 58447 CCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAG 58388
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271
|||||||| || || ||||| || || | | || ||||| ||| || | |
Sbjct 58387 ATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCA 58328
Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331
|||||| | ||||||||||| || || ||||| ||||| || | ||||| || |||||
Sbjct 58327 ATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTG 58268
Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
|| | | | || ||| | | || ||||| || ||||| |||| || || |
Sbjct 58267 AACAAGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTC 58208
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
||||| |||| |||||||| || ||||| || ||||| || |||| || | |||
Sbjct 58207 TCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATT 58148
Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511
|| || ||| ||| || | || || | || || ||||| ||||| || || || |||
Sbjct 58147 TGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCA 58088
Query 93512 aaaaaaGCCAATATATGCTTTATA-----AAATGTTTCTCATCATC-TTTAAGC--TTAT 93563
||||| |||| | ||| | | ||| | ||| | || || || | || |
Sbjct 58087 AAAAAGGCCA--GCACTCTTGAGATGAAGAAACG---CTCGTTCTCGTTCAATCTGTTGT 58033
Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623
||| ||| | ||| ||||| | ||| | || ||| ||||||| || || || || |
Sbjct 58032 TCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAG 57973
Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679
| || || ||| | ||| || || || || | ||| || || | ||| ||||||
Sbjct 57972 CCTTCTTATACGCTTGCCAAATCTCATGGTACTTAATAGGGAAGAGGACGAAACGA 57917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860751274680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |