Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6 201 1e-46 >seq6 Length=1261692 Score = 201 bits (222), Expect = 1e-46 Identities = 520/776 (67%), Gaps = 31/776 (4%) Strand=Plus/Minus Query 92921 AATCTATCAGCTACAAATTCTAT-GTACTGAGACATCAAATCACAATTCATTCCTA-GA- 92977 ||||||||||| ||| | |||| ||| ||| ||||||| | ||| ||||| || | || Sbjct 58678 AATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGAG 58620 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 ||||| | || ||||| || || ||| | ||| || || | || ||||| | | | Sbjct 58619 AGACG--CTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATG 58562 Query 93038 ATTTCTATTACTCTACTATTT--GGTGGTTT-TTGTACGACATAATTGT---ACATTAAG 93091 ||| || ||| || || | |||| | |||| | || | | | ||| || Sbjct 58561 ATT-CT----CTCAACAATCTCTGGTGCTGGCTTGTTCTTCA-AGTGGGCAAACAACAAA 58508 Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || || ||||| |||||||||||||| || | |||||||| || ||| || ||| Sbjct 58507 CAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAA 58448 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || |||| ||||| | |||||| || || || || ||| || || || Sbjct 58447 CCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAG 58388 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 |||||||| || || ||||| || || | | || ||||| ||| || | | Sbjct 58387 ATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCA 58328 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 |||||| | ||||||||||| || || ||||| ||||| || | ||||| || ||||| Sbjct 58327 ATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTG 58268 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || | | | || ||| | | || ||||| || ||||| |||| || || | Sbjct 58267 AACAAGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTC 58208 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 ||||| |||| |||||||| || ||||| || ||||| || |||| || | ||| Sbjct 58207 TCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATT 58148 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 || || ||| ||| || | || || | || || ||||| ||||| || || || ||| Sbjct 58147 TGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCA 58088 Query 93512 aaaaaaGCCAATATATGCTTTATA-----AAATGTTTCTCATCATC-TTTAAGC--TTAT 93563 ||||| |||| | ||| | | ||| | ||| | || || || | || | Sbjct 58087 AAAAAGGCCA--GCACTCTTGAGATGAAGAAACG---CTCGTTCTCGTTCAATCTGTTGT 58033 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| ||| | ||| ||||| | ||| | || ||| ||||||| || || || || | Sbjct 58032 TCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAG 57973 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679 | || || ||| | ||| || || || || | ||| || || | ||| |||||| Sbjct 57972 CCTTCTTATACGCTTGCCAAATCTCATGGTACTTAATAGGGAAGAGGACGAAACGA 57917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860751274680