Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq3 111 1e-19 seq4 95.1 1e-14 >seq1 Length=2451740 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || ||||| || || |||||||| || | || | || || || || | || ||| | Sbjct 160481 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 160540 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| || || ||||||||||||||||||||||| || |||||| | | Sbjct 160541 GACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTG 160600 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || ||||| || || || || |||||| | | ||| | || || |||||||| ||||| Sbjct 160601 ATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAG 160660 Query 22408 GAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| | || || ||| | ||||| | || ||| Sbjct 160661 GAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGT 160699 >seq3 Length=2123196 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || ||||| | || ||||| || | || | || || || || Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || ||||| |||||||| ||||| || Sbjct 1815683 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGAC 1815624 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || |||||||| || || || |||||| | || | || || ||| Sbjct 1815623 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 1815564 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||||| | || || ||| | ||||| | || ||| Sbjct 1815563 AACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGT 1815513 >seq4 Length=1931745 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22267 GTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATT 22326 || ||| || | || ||| | ||| | |||| || || || ||||||||||||||| Sbjct 933914 GTTGAATCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATT 933855 Query 22327 CCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTC 22386 ||||| || || ||| | | || || || || ||||| || |||||| | | ||| | Sbjct 933854 CCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAGGATGGCAGAACCTTG 933795 Query 22387 TCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||||||||||||| || ||||| | || || ||| | ||||| | || ||| Sbjct 933794 TCTGACTACAACATTCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGGT 933735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727964191955