Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 3e-21
seq3 111 1e-19
seq4 95.1 1e-14
>seq1
Length=2451740
Score = 116 bits (128), Expect = 3e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| ||||| || || |||||||| || | || | || || || || | || ||| |
Sbjct 160481 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 160540
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| || |||| || || ||||||||||||||||||||||| || |||||| | |
Sbjct 160541 GACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTG 160600
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407
|| ||||| || || || || |||||| | | ||| | || || |||||||| |||||
Sbjct 160601 ATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAG 160660
Query 22408 GAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| | || || ||| | ||||| | || |||
Sbjct 160661 GAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGT 160699
>seq3
Length=2123196
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || ||||| | || ||||| || | || | || || || ||
Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || || || ||||| |||||||| ||||| ||
Sbjct 1815683 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGAC 1815624
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || |||||||| || || || |||||| | || | || || |||
Sbjct 1815623 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 1815564
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| || ||||| | || || ||| | ||||| | || |||
Sbjct 1815563 AACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGT 1815513
>seq4
Length=1931745
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22267 GTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATT 22326
|| ||| || | || ||| | ||| | |||| || || || |||||||||||||||
Sbjct 933914 GTTGAATCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATT 933855
Query 22327 CCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTC 22386
||||| || || ||| | | || || || || ||||| || |||||| | | ||| |
Sbjct 933854 CCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAGGATGGCAGAACCTTG 933795
Query 22387 TCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || |||||||||||||| || ||||| | || || ||| | ||||| | || |||
Sbjct 933794 TCTGACTACAACATTCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGGT 933735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727964191955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |