Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 170 4e-37 >seq6 Length=1261692 Score = 170 bits (188), Expect = 4e-37 Identities = 545/839 (65%), Gaps = 10/839 (1%) Strand=Plus/Plus Query 42311 GTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGACAC 42370 ||| |||||||| || ||| |||||| |||||||||||||| | | ||||| Sbjct 57962 GTATAAGAAGGCTGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATTTATCAAAGGATTT 58021 Query 42371 GGCCGGCTGGGAGTC---ACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGC 42427 | || |||| | | || |||||||| || ||| || || | ||||| Sbjct 58022 GCACGACTGGAACAACAGATTGAACGAGAACGAGCGTTTCTTCATCTCAAGAGTGCTGGC 58081 Query 42428 CTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGA 42487 ||| || ||||| |||||||| || ||||| |||||| ||| | ||| ||| Sbjct 58082 CTTTTTTGCCGCTTCTGACGGTATCGTCAACGAGAACTTGGTTGAAAACTTCTCTGCAGA 58141 Query 42488 GGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCA 42547 ||| || | ||||| |||||||| || |||||||| || |||||| | || Sbjct 58142 GGTTCAAATCCCAGAGGCTAAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCA 58201 Query 42548 CTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGG 42607 ||||||| ||| || || || |||| |||||| ||| || ||| | | Sbjct 58202 CTCTGAGACTTACTCCTTGTTGATCGACACCTACATCAAGGACCCAAAGGAGGCTGAGTT 58261 Query 42608 GCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAA 42667 ||||||| ||||| || || || || || |||||||||||||| || ||||| | | Sbjct 58262 CTTGTTCAACGCCATTGAAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAG 58321 Query 42668 CTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||| | | ||||| || | ||||| || || || ||| | || || || Sbjct 58322 ATGGATTGCCGATGATGACGCCCTATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGA 58381 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGA 42786 || ||||||||||| || | |||||||||||||| ||| | ||| ||| |||| | || Sbjct 58382 AGGTATCTTCTTCTCCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGT-TTGA 58440 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| || | |||||||| ||||| | || || | ||||| || | || | || | Sbjct 58441 TGCCAGGTTTGACCTTCTCTAACGAGTTGATTTGCCGTGACGAAGGTTTACACACCGATT 58500 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGG 42906 | || || | |||| | |||| | | | ||||||| | ||| || | Sbjct 58501 TCGCTTGTTTGTTGTTTGC---CCACTTGAAGAACAAGCCAGCACCAGAGATTGTTGAGA 58557 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966 |||||||| || || || ||||| || |||| | | || | | || || | || Sbjct 58558 GAATCATCACCGAAGCTGTCGAGATTGAATCAGAGTACTTTACAGATGCTCTTCCAGCGT 58617 Query 42967 CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA-CCAT 43025 | || | || |||||| | | ||||| | ||| | | | || || || Sbjct 58618 CTCTCTTGGGTATGAACTGTAAGTTGATGTGTCAATACGTTAGATTCTGTGCTGATAGAT 58677 Query 43026 CTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATG 43085 | || || | ||| || |||||||| | ||| |||||||||||| Sbjct 58678 TGCTCGTTGCA-CTTGGTAACAAGAAGTTCTACAACGATACAAACCCATTCGACTTTATG 58736 Query 43086 GAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| | | || ||||| ||||| ||||||||| | ||| | || ||||| Sbjct 58737 GAGAACATCTCCCTTGCTGGTAAGACAAACTTCTTCGAGAAGAGAGTCTCTGATTACCA 58795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339117370320