Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 284 1e-71 seq6 109 7e-19 seq4 100 3e-16 >seq5 Length=1517892 Score = 284 bits (314), Expect = 1e-71 Identities = 907/1393 (65%), Gaps = 33/1393 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 |||||||| | |||||||||||||| || || |||| |||||||||||| | || ||| Sbjct 776592 TAGATATTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAG 776533 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| ||||| | | ||| ||| | | ||| | | |||| | Sbjct 776532 GCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCT 776473 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121 || | | |||||| || | | ||| || | ||| | ||||| || | Sbjct 776472 TTCAATGAGTCCCAATCCCACAAGTCAGTTGGCTTACGACCCCAGAGGTCAAATTGCAAT 776413 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181 || || || ||||| || || || | ||||| | || ||| | | ||||| Sbjct 776412 TGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAAC 776353 Query 114182 TCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238 || ||| ||||||| || |||| || || || ||||| || | |||| Sbjct 776352 TCAACAGAG---GCCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATGTTCAAC 776296 Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298 | || || | || || ||||| | | || ||| || || ||||||| || ||| Sbjct 776295 TCTTTAGCAGCATCAGACTCAAAAGGCATACGTAACATCATGAAGGCATCCGCAAGGCCT 776236 Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGG 114357 |||||||| ||| ||||||| | | |||||| ||||| ||||| ||| | | || Sbjct 776235 TGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCT-TCTGGAACTGG 776177 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || |||| || ||||| | || || | || || || | ||||| | || || || Sbjct 776176 GTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAATATCGTG 776117 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA------------GG 114465 | ||||| | | | | || | ||||| ||| || |||| || Sbjct 776116 CAACTTTTGGAAGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGAAAGCTGG 776057 Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 |||||| || || |||| ||||| |||| ||| || | || |||||| | ||| Sbjct 776056 AAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAAT 775997 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 || |||||| || ||| ||| ||| | ||||||||||| ||||| |||||| |||| Sbjct 775996 CTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTT 775937 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 ||| ||||| || ||||||||| |||| || || || || || || | || | || || Sbjct 775936 ACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGC 775877 Query 114646 CTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 114704 | ||||| | | | | || |||||| | || || || | |||||||||| Sbjct 775876 ATACCAGAGCTTTTGAGCCTT-CACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTG 775818 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764 | || | |||||||| || ||||| || || | | || | |||| || ||| Sbjct 775817 TATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAG 775758 Query 114765 AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGA 114824 |||| | || ||||| ||| || ||||||||||||||||| || ||||| ||||| | Sbjct 775757 AGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACA 775698 Query 114825 GAGCTGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 |||| ||| | ||| ||| | || | ||||| | || || || | | || Sbjct 775697 AGGCTGGGAACAAATCACGAGCTCTGATC-TCTTCCTTACCGTGGTTCTTTCTGATATCG 775639 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 114942 | || || | ||||||||||||||| || |||| ||||| || | || ||| | Sbjct 775638 ATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTC 775579 Query 114943 ACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 | |||| | |||| || || || || ||| |||||| || || | ||| ||||| Sbjct 775578 TTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATC 775519 Query 115001 ATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACT-TATTGGCTCTGACATCA 115057 | ||||| ||| || || || || ||| || || || || | ||||| || Sbjct 775518 AAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACT---TCTGATATTG 775462 Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 || ||||||| ||| ||||| || || ||| ||||| || || | | | | || Sbjct 775461 TGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTG 775402 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 ||||||| || ||||| ||||| |||| | || | ||||| || ||||| ||| Sbjct 775401 TCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGT 775342 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 115237 || ||||| |||||||| ||||| | ||||| | ||||| |||| || || ||| Sbjct 775341 GGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGAC 775282 Query 115238 ATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 115297 ||| | ||| || || | |||| || ||| ||||| |||||||| | || Sbjct 775281 ATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACA 775222 Query 115298 CGCATAAACATGT 115310 ||||| | || || Sbjct 775221 CGCATCACCAAGT 775209 >seq6 Length=1261692 Score = 109 bits (120), Expect = 7e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| | ||| ||||||||| | || | || || |||||| || |||||||| | ||| Sbjct 58493 GTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATCAAACC 58434 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 | |||||||||||| || || | |||||||| ||||||||||| || || ||| Sbjct 58433 TCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCAACAGC 58374 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTTCATCG 126236 || || |||| ||| | ||| ||||| || ||| | | | | ||| ||| ||| | Sbjct 58373 AGCAAAAGCAACGAGTCTCTCTGCAAA-TAGGGCGTCATCATCGGCAATCCATCTCAAAG 58315 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGT 126270 |||| | ||||| |||| |||||| |||| ||| Sbjct 58314 CCCAATCAGCCTTCTTCTTGATACATGGGATGGT 58281 >seq4 Length=1931745 Score = 100 bits (110), Expect = 3e-16 Identities = 282/433 (65%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 ||| ||| || ||| ||||||||||| |||||||| |||| ||||| | || | ||| Sbjct 970615 GCCATTGTTCTGAGATAGTACATCCCTGTCTTGAGTCCCTTTTTCCATCCGTAGAAGTGC 970556 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || |||| | ||| | || |||||| |||| | | |||||| ||||||||| Sbjct 970555 ATGGAGGTTAGCTTCCCAACAGTGGGACTTCTCATGTAAATGTTCATGGATTGGGATTGG 970496 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 113767 |||||||| | |||| || |||| | ||||| || | ||| ||||| Sbjct 970495 TCGATGAAAGGCGCACGGTCGACCGCGAGGTCAATTACTGTGCGCTGAGGGATCTCCCAT 970436 Query 113768 ACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCA 113827 || || |||| || | || | | | ||| || | || || |||||||| || Sbjct 970435 ACGGTCTTGTACAGCTCTTTCAAAGTCTGTGGAATGATGTCAATGTTCTGGATGGAACCT 970376 Query 113828 CCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCC 113887 | | | ||| || ||| ||||||||||| ||| | |||| || | ||||| Sbjct 970375 TCGTCGTCGACAATTCGATTCTTCATATCCTGGTCCCATAACCCAAGCTCGATAAGATCA 970316 Query 113888 TCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATA 113947 | || | | | || || || ||||| || | ||| | || || ||| Sbjct 970315 TTTACCAAGTATCTGTTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTATATA 970256 Query 113948 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTG 114007 || | || |||||| |||||||||||| |||||||| || | ||| || ||||| Sbjct 970255 TTCGAAGTTATTGGCTCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGCTGTA 970196 Query 114008 GGCATGGGTGCCA 114020 ||||| ||| ||| Sbjct 970195 GGCATTGGTCCCA 970183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353547731560