Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 260 2e-64 seq6 100 3e-16 >seq5 Length=1517892 Score = 260 bits (288), Expect = 2e-64 Identities = 901/1393 (65%), Gaps = 33/1393 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||| || | |||||||||||||| || || |||| |||||||||||| | ||| ||| Sbjct 776592 TAGATATTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAG 776533 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| ||||| | | ||| ||| | | ||| | |||| | Sbjct 776532 GCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCT 776473 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 || | | |||||| || | | ||| || | |||| | ||||| || | Sbjct 776472 TTCAATGAGTCCCAATCCCACAAGTCAGTTGGCTTACGACCCCAGAGGTCAAATTGCAAT 776413 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 || || || ||||| || || || | || || | || ||| | | ||||| Sbjct 776412 TGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAAC 776353 Query 116143 TCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 || ||| ||||||| || |||| || || || ||||| || | |||| Sbjct 776352 TCAACAGAG---GCCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATGTTCAAC 776296 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 | || || | || || ||||| | | ||| ||| || || ||||||| || ||| Sbjct 776295 TCTTTAGCAGCATCAGACTCAAAAGGCATACGTAACATCATGAAGGCATCCGCAAGGCCT 776236 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGG 116318 |||||||| ||| ||||||| | | |||||| ||||| ||||| ||| | | || Sbjct 776235 TGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCT-TCTGGAACTGG 776177 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 || |||| || ||||| | || || | || || || | ||||| | || || || Sbjct 776176 GTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAATATCGTG 776117 Query 116379 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA------------GG 116426 | ||||| | | | | || | ||||| ||| || |||| || Sbjct 776116 CAACTTTTGGAAGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGAAAGCTGG 776057 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 |||||| || || |||| ||||| |||| ||| || | || |||||| | ||| Sbjct 776056 AAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAAT 775997 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 || |||||| || ||| ||| ||| | ||||||||||| ||||| |||||| |||| Sbjct 775996 CTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTT 775937 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||| || || ||||| |||| || || || || || || | || | || || Sbjct 775936 ACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGC 775877 Query 116607 CTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 116665 | ||| | | | | | || |||||| | || || || | |||||||||| Sbjct 775876 ATACCAGAGCTTTTGAGCCT-TCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTG 775818 Query 116666 TGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGAC 116725 | || | || ||||| || ||||| || || | | || | |||| || |||| Sbjct 775817 TATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAG 775758 Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785 |||| | || ||||| ||| || ||||| ||||||||||| || ||||| ||||| | Sbjct 775757 AGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACA 775698 Query 116786 GCGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844 || | ||| | ||| ||| | || | ||||| | || || || | | || Sbjct 775697 AGGCTGGGAACAAATCACGAGCTCTGATC-TCTTCCTTACCGTGGTTCTTTCTGATATCG 775639 Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGA 116904 | || || | ||||||||||||||| || |||| ||||| || | || | ||| | Sbjct 775638 ATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATG-CACCTGGTCT 775580 Query 116905 C----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960 | |||| | |||| || || || || || ||||| || || | ||| ||||| Sbjct 775579 CTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAAT 775520 Query 116961 GATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCG 117018 | ||||| ||| || || || || ||| || || || | ||||| || | Sbjct 775519 CAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCT--GTACTTCTGATATTG 775462 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 || ||||||| ||| ||||| || || ||| ||||| || || | | | | || Sbjct 775461 TGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTG 775402 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 ||||||| || ||||| ||||| |||| | || | |||||| || ||||| ||| Sbjct 775401 TCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGT 775342 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 117198 || ||||| |||||||| ||||| | ||||| | ||||| |||| || || ||| Sbjct 775341 GGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGAC 775282 Query 117199 ATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACC 117258 ||| | ||| || || | || || || ||| ||||| |||||||| | || Sbjct 775281 ATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACA 775222 Query 117259 CGCATAAACATGT 117271 ||||| | || || Sbjct 775221 CGCATCACCAAGT 775209 >seq6 Length=1261692 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| | ||| ||||||||| | || | || || |||||| || ||||||||| | ||| Sbjct 58493 GTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATCAAACC 58434 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 | |||||||||||| || || | ||||| || ||||||||||| || || ||| Sbjct 58433 TCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCAACAGC 58374 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 || || |||| || | ||| ||||| || | | | | | ||| ||| ||| | Sbjct 58373 AGCAAAAGCAACGAGTCTCTCTGCAAA-TAGGGCGTCATCATCGGCAATCCATCTCAAAG 58315 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGT 127743 |||| | ||||| |||| ||||||||||| ||| Sbjct 58314 CCCAATCAGCCTTCTTCTTGATACATGGGATGGT 58281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507146318120