Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3 132 1e-25 seq1 95.1 3e-14 seq4 84.2 5e-11 >seq3 Length=2123196 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| ||||| ||||||||||||| ||||||||||| |||||| || || Sbjct 1815525 TCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1815584 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| ||||| ||||| ||||| | | || ||||| || || || ||| Sbjct 1815585 ATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTT 1815644 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| ||| || | |||||| | | || || ||||| || || Sbjct 1815645 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAAGGTAAT 1815704 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || ||||| || |||||||| Sbjct 1815705 GGTCTTACCTGTAAGGGTTTTGACGAAAATTTG 1815737 >seq1 Length=2451740 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| ||||| ||||||||||||| ||||||||||| ||| || || || Sbjct 160687 TCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 160628 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| ||||| || || ||||| | | || ||||| || ||| || || Sbjct 160627 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTT 160568 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | | || || ||||| || || Sbjct 160567 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 160508 Query 199594 CGTCTTACCCGT 199605 |||||||| || Sbjct 160507 GGTCTTACCGGT 160496 >seq4 Length=1931745 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| ||||| ||||||||||| | ||||||||||| ||| || || || Sbjct 933747 TCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 933806 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| || || || ||||| || | | |||||||| || ||| || || Sbjct 933807 ATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTT 933866 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 ||||| ||||| ||| ||| || | |||||| Sbjct 933867 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTC 933902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921494265469