Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 1e-25
seq1 95.1 3e-14
seq4 84.2 5e-11
>seq3
Length=2123196
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | ||| ||||| ||||||||||||| ||||||||||| |||||| || ||
Sbjct 1815525 TCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1815584
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| ||||| ||||| ||||| | | || ||||| || || || |||
Sbjct 1815585 ATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTT 1815644
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| ||| || | |||||| | | || || ||||| || ||
Sbjct 1815645 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAAGGTAAT 1815704
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || ||||| || ||||||||
Sbjct 1815705 GGTCTTACCTGTAAGGGTTTTGACGAAAATTTG 1815737
>seq1
Length=2451740
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | ||| ||||| ||||||||||||| ||||||||||| ||| || || ||
Sbjct 160687 TCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 160628
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| ||||| || || ||||| | | || ||||| || ||| || ||
Sbjct 160627 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTT 160568
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | || || ||||| || ||
Sbjct 160567 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 160508
Query 199594 CGTCTTACCCGT 199605
|||||||| ||
Sbjct 160507 GGTCTTACCGGT 160496
>seq4
Length=1931745
Score = 84.2 bits (92), Expect = 5e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| || || | ||| ||||| ||||||||||| | ||||||||||| ||| || || ||
Sbjct 933747 TCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 933806
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| || || || ||||| || | | |||||||| || ||| || ||
Sbjct 933807 ATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTT 933866
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
||||| ||||| ||| ||| || | ||||||
Sbjct 933867 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTC 933902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921494265469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |