Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq6 176 5e-39
seq3 95.1 1e-14
>seq6
Length=1261692
Score = 176 bits (194), Expect = 5e-39
Identities = 377/559 (67%), Gaps = 11/559 (2%)
Strand=Plus/Minus
Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945
|||| ||| ||||| || ||| || || || ||||| | | |||| | ||||| |
Sbjct 58516 AACAACAAACAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAG 58457
Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005
|| ||||| || ||||| | || | || || | |||||| |||| |||||| ||
Sbjct 58456 AAGGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCG 58397
Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065
|| ||||||| || || || || || ||||| || || | ||| | || ||| ||
Sbjct 58396 GAGAAGAAGATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCA 58337
Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
| ||| ||||| | || ||||| || ||||| | |||| || || || |||||
Sbjct 58336 TCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCA 58277
Query 133126 ATGGCGTTCAACAA--ACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGG 133183
|||||||| ||||| || || || || | | | |||||||||||| |
Sbjct 58276 ATGGCGTTGAACAAGAACTCAGCCTCCTTT--GGGTCCTTGATGTAGGTGTCGATCAACA 58219
Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243
|| || | || ||||| | ||||||||| ||| || || || || |||||| |
Sbjct 58218 AGGAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAG 58159
Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303
|||| | || || ||| || ||| || |||| || ||||||||||| ||||
Sbjct 58158 CCTCTGGGATTTGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGT 58099
Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTT--GATGAAATGGCGCTCGTTGTCGTTCAA 133361
| ||||| |||||||||||||| ||| |||||| |||||||| ||||||||
Sbjct 58098 CAGAAGCGGCAAAAAAGGCCAGCAC--TCTTGAGATGAAGAAACGCTCGTTCTCGTTCAA 58041
Query 133362 ---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGA 133418
| | ||||||| || ||||| || | || | ||||||| | ||||| || ||
Sbjct 58040 TCTGTTGTTCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGA 57981
Query 133419 CGCCTCGGCTTTTTTGTAC 133437
||||| || || || |||
Sbjct 57980 AGCCTCAGCCTTCTTATAC 57962
>seq3
Length=2123196
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| |||||||| ||||| ||||| || || || || ||||| ||| | || || ||| ||
Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||||||||| || || | ||
Sbjct 1815683 TCCGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGA 1815625
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|||||| | | || | || || || || |||| || | | || | |||||
Sbjct 1815624 CCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTA 1815565
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||| | || || || ||||| || | |||||||| ||
Sbjct 1815564 CAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 1815514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172756234880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |