Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 176 5e-39 seq3 95.1 1e-14 >seq6 Length=1261692 Score = 176 bits (194), Expect = 5e-39 Identities = 377/559 (67%), Gaps = 11/559 (2%) Strand=Plus/Minus Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945 |||| ||| ||||| || ||| || || || ||||| | | |||| | ||||| | Sbjct 58516 AACAACAAACAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAG 58457 Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 || ||||| || ||||| | || | || || | |||||| |||| |||||| || Sbjct 58456 AAGGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCG 58397 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065 || ||||||| || || || || || ||||| || || | ||| | || ||| || Sbjct 58396 GAGAAGAAGATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCA 58337 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 | ||| ||||| | || ||||| || ||||| | |||| || || || ||||| Sbjct 58336 TCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCA 58277 Query 133126 ATGGCGTTCAACAA--ACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGG 133183 |||||||| ||||| || || || || | | | |||||||||||| | Sbjct 58276 ATGGCGTTGAACAAGAACTCAGCCTCCTTT--GGGTCCTTGATGTAGGTGTCGATCAACA 58219 Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243 || || | || ||||| | ||||||||| ||| || || || || |||||| | Sbjct 58218 AGGAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAG 58159 Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303 |||| | || || ||| || ||| || |||| || ||||||||||| |||| Sbjct 58158 CCTCTGGGATTTGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGT 58099 Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTT--GATGAAATGGCGCTCGTTGTCGTTCAA 133361 | ||||| |||||||||||||| ||| |||||| |||||||| |||||||| Sbjct 58098 CAGAAGCGGCAAAAAAGGCCAGCAC--TCTTGAGATGAAGAAACGCTCGTTCTCGTTCAA 58041 Query 133362 ---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGA 133418 | | ||||||| || ||||| || | || | ||||||| | ||||| || || Sbjct 58040 TCTGTTGTTCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGA 57981 Query 133419 CGCCTCGGCTTTTTTGTAC 133437 ||||| || || || ||| Sbjct 57980 AGCCTCAGCCTTCTTATAC 57962 >seq3 Length=2123196 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| || || || || ||||| ||| | || || ||| || Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||||||||| || || | || Sbjct 1815683 TCCGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGA 1815625 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||| | | || | || || || || |||| || | | || | ||||| Sbjct 1815624 CCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTA 1815565 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || || || ||||| || | |||||||| || Sbjct 1815564 CAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 1815514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172756234880