Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7 205 4e-47 seq6 141 4e-28 seq1 100 1e-15 >seq7 Length=1265681 Score = 205 bits (226), Expect = 4e-47 Identities = 820/1268 (65%), Gaps = 40/1268 (3%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||| || || || || |||||| | || || ||||| |||||||| || | | | | Sbjct 427468 CCTGAGGAGATCTCTTCAATGGTTTTGACAAAGATGAAGGAAACAGCTGAGAACTTTTTG 427409 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| | || | ||||| || || || || || || || || || ||| | ||| | Sbjct 427408 GGTAGCGCCGTGAAGGATGCCGTCATCACGGTGCCGGCCTACTTTAACGATTCTCAAAGA 427349 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| || |||||||| || ||||||||||| || |||||||| || ||||| ||| Sbjct 427348 CAAGCTACCAAAGATGCCGGTTTGATTGCTGGTTTGAACGTTCTTCGTATCATTAACGAA 427289 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || || ||||| || | ||||| || | ||| || || | | || ||| | || Sbjct 427288 CCAACTGCAGCAGCAATTGCATACGG-TTTGGACAA-GAAGGGTCAAAG-TGAACACAAC 427232 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 | | | || ||||| ||||| || ||| ||| || | ||||| || || || Sbjct 427231 GTCCTTATCTTCGATTTGGGTGGTGGTACTTTCGATGTCTCATTGCTTTCTATCGATGAC 427172 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || | |||||||| ||||||||| ||||||||||| | || ||||||||| | ||| Sbjct 427171 GGTATCTTTGAAGTTAAGGCAACCGCCGGTGATACTCACTTGGGTGGTGAAGATTTCGAT 427112 Query 451604 AATGCAA--TTGTGGAATGGTTGAAAACTGATGTTCAA-CGAA--AACTAAAAGTAGATA 451658 || ||| |||| || | ||| ||||| |||||| ||| ||| ||||| |||| Sbjct 427111 AA--CAAGCTTGTTGACTTCTTGGCCACTGA-GTTCAAGAGAAAGAACAAAAAG--GATA 427057 Query 451659 TTTCTACTAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTA 451718 | | | ||||||| | | | ||| | | | |||| | ||||| | ||| || | | Sbjct 427056 TCACCTCAAACCAAAGATCTTTGAGAAGATTGAGAACAGCTGCAGAGAGAGCCAAGAGAA 426997 Query 451719 C--ACTCA-GTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGG 451775 | ||| ||| ||||| || | || | ||||| || | || || || | Sbjct 426996 CCTTGTCATCTTCTGCACAAGCTTC---AATCGAGATTGACTCATTGTTCGAGGGTATCG 426940 Query 451776 ATTATGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTC-CAGTATTTTTGCA 451834 ||| ||| || |||| | || | ||| ||| | ||||| | | || | Sbjct 426939 ATTTCTACACTTCTATTACTAGAGCCAGATTCGAAGAGTTGTGTTCTGAACAATTCAGAT 426880 Query 451835 CGGGTAATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATT 451894 | | || | || || || | || || | ||| | || | ||| | | || Sbjct 426879 CAACT-TTGGAGCCAGTGGAGAAGGTTTTGAAGGATGCCAAGTTGGACAAATCTCAGGTT 426821 Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCT 451954 || || ||||| ||||| || |||||||| ||||||| || |||||| | || | ||| Sbjct 426820 GACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATTCCAAAGATTCAAAAATTGGTTTCT 426761 Query 451955 TCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATAT 452014 || || || || | | | ||| | | || |||||||| |||||||| || Sbjct 426760 GATTTCTTCAACGGTAAGGAGCCAAACAAGTCCATCAACCCTGATGAGGCTGTTGCTTAC 426701 Query 452015 GGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGAT-GATGAAAAATTAGGA----- 452068 |||||||| || ||||| ||||| | || ||| ||| | || | | || Sbjct 426700 GGTGCTGCTGTCCAAGCTGCTATCATCACTGGT---GATACCTCCAACACAAAGACCCAG 426644 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 || | || | | ||||| | || |||| ||||| |||| || |||||||| || Sbjct 426643 GACTTGTTGCTTTTGGATGTCGCTCCATTATCCCTTGGTATTGAGACCGCTGGTGGTATC 426584 Query 452129 ATGACTAATTTAATTAAACGAGGAACT--TCTATTCCTTGTAAAAAG-AGTC--AAACAT 452183 ||||| || || ||| | || |||| | || || | |||| |||| | || | Sbjct 426583 ATGACCAAGTTGATT--CCAAGAAACTCCACCATCCC---AACAAAGAAGTCGGAGACTT 426529 Query 452184 TTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTG 452243 | ||| |||||||||||||||||| ||||||||||||||||| || | Sbjct 426528 TCTCTACCTATGCTGATAACCAACCAGGTGTGTTGATTCAAGTGTTTGAAGGTGAGAGAA 426469 Query 452244 CAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGC 452303 | | || ||||| || | || | ||| ||||| ||||| ||| | Sbjct 426468 CCAGAACCAAGGATAACAACTTGTTGGGTAAGTTTGAGCTTTCTGGTATTCCACCTGCAC 426409 Query 452304 CAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATG 452363 |||| || ||| || || || |||||| ||| ||||||| |||||||| | || | Sbjct 426408 CAAGAGGTGTTCCACAGATCGAGGTTACCTTTGACATTGATGCCAATGGTATCTTGAACG 426349 Query 452364 TGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAA 452423 | ||| || || || |||| || || | || || || || || || || || Sbjct 426348 TATCTGCTGTGGAGAAGGGTACTGGTAAGTCCAACAAGATCACCATCACCAACGACAAGG 426289 Query 452424 ACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATG 452483 | || || || |||||||| || | |||||| ||||| || || ||||| | || Sbjct 426288 GTAGATTGTCCAAGGAAGATATCGAGAGAATGGTTTCCGAAGCTGAGAAGTTCAAAGCTG 426229 Query 452484 ATGATGAA 452491 | |||||| Sbjct 426228 AGGATGAA 426221 >seq6 Length=1261692 Score = 141 bits (156), Expect = 4e-28 Identities = 841/1326 (63%), Gaps = 59/1326 (4%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | || ||||| | | |||||||| || || ||| | || ||||| Sbjct 51320 GGTAAGCCAAAGATCCAAGTTGAATTCAAAGGTGAGACCAAGGTTTTCACCCCAGAAGAG 51379 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || |||||| | ||| ||||| ||||| || || | | ||| || Sbjct 51380 ATCTCCTCCATGGTTTTGCTTAAGATGAAGGAAACCGCTGAGGGTTTCTTGGGTACTGAG 51439 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| ||||| || | || ||||| ||||| ||||| ||| | ||| | ||||| || Sbjct 51440 GTTAAGGATGCCGTTGTCACCGTTCCAGCTTACTTCAACGATTCTCAAAGACAAGCTACA 51499 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || ||| ||||||| || | | || || || || || || || || Sbjct 51500 AAGGATGCTGGTTTGATTTCTGGTTTGAACATCTTGCGTATCATCAACGAGCCAACCGCT 51559 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAG---aaaaaaaTATTTTA 451489 ||||| | || || || | ||| || |||| | |||| | || || |||| Sbjct 51560 GCTGCCATTGCTTACGGTTT-GGACAAG---AAGA--CTGAAGGTGAGAAGAACGTTTTG 51613 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 | ||||| || ||||| || ||| ||| || | | | ||||||||||| | Sbjct 51614 ATCTTTGACTTGGGTGGTGGTACTTTCGATGTCTCCCTCTTGGCTATTGAAGATGGTATC 51673 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCA 451609 || ||||| ||||| ||| |||||||||||| | || ||||||||| | || || || Sbjct 51674 TTCGAAGTCAAGGCCACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGACAA--CA 51731 Query 451610 A--TTGTGGA----ATGGTTGAAAACTGATGTTCAA-CGAA--AACTAAAAGTAGATATT 451660 | |||| || |||||| | || |||||| ||| ||| ||||| || | Sbjct 51732 AGCTTGTTGACCACTTGGTTG----CCGA-GTTCAAGAGAAAGAACAAAAAG--GACTTG 51784 Query 451661 TCTACTAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACA 451720 | || ||||||| | | | ||| | | | ||| | || || | |||||| | || Sbjct 51785 ACCACCAACCAAAGATCTTTGAGAAGATTGAGAACTGCTGCTGAGAGAGCTAAGAGAACC 51844 Query 451721 CT---CAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGA- 451776 | ||| | ||| || | ||| | |||||| || || || || || Sbjct 51845 TTGTCTTCTTCTGCTCAAGCTTC---TATTGAGATTGATTCCTTGTACGAAGGTATTGAC 51901 Query 451777 TTATGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTT----TG 451832 || | | || || | ||| | |||| ||| ||| ||||| | ||| || | Sbjct 51902 TTCTAC-ACCTCTATCACCAGAGCTAGATTCGAAGAGCTTTGTGCTTCTATGTTCAGATC 51960 Query 451833 CACGGGTAATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAA 451892 ||| || | || ||||| | || || ||| | | ||| || Sbjct 51961 CAC----TTTGGAGCCAGTTGAGAAGGTTTTGAGAGATGCCGGTTTGGATAAGTCCCAAG 52016 Query 451893 TTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT 451952 || | || ||||| ||||| || |||||||| ||||||| || ||||| | | | | Sbjct 52017 TTCACGAGATTGTCCTTGTCGGTGGTTCTACCAGAATTCCAAAGGTTCAAAAGCTCGTCT 52076 Query 451953 CTTCTTATTTTGGAGGAAAACAACTATGTAAGAG---CGTAAATCCTGATGAAGCTGTTG 452009 || | || || || | | | || || | | || || ||||| ||||||| Sbjct 52077 CTGAGTTCTTCAACGGTAAGGAGCCA---AACAGATCCATCAACCCAGATGAGGCTGTTG 52133 Query 452010 CATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAAAATTAGGA 452068 | || |||||||| || ||||| ||||| | || ||| | || | || | | | Sbjct 52134 CTTACGGTGCTGCTGTCCAAGCTGCTATCTTGACCGGTGACCAATCTTCCAAGACT-CAA 52192 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 || | || | | ||||| | || | || ||||| |||| || |||||||| | Sbjct 52193 GACTTGTTGCTTTTGGATGTTGCTCCATTGTCCCTTGGTATTGAGACCGCTGGTGGTGTC 52252 Query 452129 ATGACTAATTTAATTAAACGAGGAACT--TCTATTCCTTGTAAAAAGAGTCAAACATTTA 452186 ||||| || || ||| | || |||| | ||||| ||| | |||| | | || Sbjct 52253 ATGACCAAGTTGATT--CCAAGAAACTCCACCATTCCAACTAAGA--AGTCTGAGACTTT 52308 Query 452187 GTACAGCAA--GTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGC 452244 | || | | ||| |||||||||||||| ||||||||||||||||| ||| | || Sbjct 52309 CTCCACCTACGCTGACAACCAACCAGGTGTCTTGATTCAAGTGTTTGAAGGTGAAAGAGC 52368 Query 452245 AATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCC 452304 | ||| ||| || || | || | ||| ||||| ||||| ||| || Sbjct 52369 TAGAACAAAAGACAACAACTTGTTGGGTAAGTTTGAGCTTTCCGGTATTCCACCTGCACC 52428 Query 452305 AAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGT 452364 ||| || ||| |||||||| |||||| ||| |||||||| || ||||| | || || Sbjct 52429 AAGAGGTGTTCCACAAATTGAGGTTACCTTTGACGTTGATGCCAACGGTATCTTGAACGT 52488 Query 452365 GAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAA 452424 || || || || |||| || || | || || || || || || || || Sbjct 52489 TTCCGCTGTCGAGAAGGGTACTGGTAAGTCCAACAAGATCACCATCACCAACGACAAGGG 52548 Query 452425 CCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGA 452484 | || || || || |||||||| | |||||| |||||| || || | |||||| || Sbjct 52549 TAGATTGTCCAAGGAGGATATTGAGAGAATGGTTTCTGAAGCCGAGAAGTACAAGGAGGA 52608 Query 452485 TGATGA 452490 ||||| Sbjct 52609 GGATGA 52614 >seq1 Length=2451740 Score = 100 bits (110), Expect = 1e-15 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 451223 GGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAA 451282 ||||| | || || |||||||| |||| || || ||||||||| | || || ||||| Sbjct 491094 GGTGAGAAGAAGACCTTTGCTCCACAAGAGATCTCCTCTATGGTTTTGACCAAGATGAAG 491153 Query 451283 GAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCT 451342 || | || || | |||||| ||| | || || ||||||||||| ||| Sbjct 491154 GAGATTGCTGAGGCCAAGATTGGTCAAAAGGTTGAGAAGGCTGTTATTACTGTTCCAGCT 491213 Query 451343 TATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAAT 451402 || ||||| || || ||||| ||||| || || ||||| || ||||| ||||| || Sbjct 491214 TACTTCAACGACGCTCAACGTCAAGCCACCAAGGATGCTGGTGCCATTGCCGGTTTGAAC 491273 Query 451403 GTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 ||| | || || ||||| || || || || ||||| Sbjct 491274 GTTTTGCGTATCATTAACGAGCCAACTGCCGCTGC 491308 Score = 87.8 bits (96), Expect = 7e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || || |||||||| | ||| | | ||| ||||| ||| || ||| | || | Sbjct 2061530 CCAGAGGAAATTTCCGCCATGATCTTGGGTAAGATGAAGCAAATCGCTGAAGATTACTTG 2061589 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| ||||| || | ||||| |||| || || ||||| ||||| || || ||| Sbjct 2061590 GGTAAGCCAGTCACCCACGCAGTTGTTACAGTCCCAGCTTACTTCAACGACGCTCAAAAA 2061649 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| ||||| ||||| || ||||||||||| || ||||| ||||| | || ||| Sbjct 2061650 CAAGCGACTAAGGATGCCGGTGCAATTGCTGGTTTGAACGTTCTGAGAATTGTCAACGAA 2061709 Query 451424 CCTACAGCAGCTGCTCTAGCATATGG 451449 || || || || ||| | || || || Sbjct 2061710 CCAACCGCTGCAGCTATTGCTTACGG 2061735 Score = 84.2 bits (92), Expect = 9e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || |||||||| ||||| | ||||||||| | ||||| || ||||||||||| || || Sbjct 1609399 GTGAATACAACTGTTTTAGCAGGCATATTCAGACCAATGGAGAAAGTTTCAGTAGCAAAG 1609340 Query 420868 AAAACTTTAATTAAttttt-ttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926 | ||||| | || || ||| | ||||||| || | || ||||| ||||| || | Sbjct 1609339 AGCACTTTTAATAGCCCTTCTTGGA-AAAGAATCTCTATGATCTCTTTCAAAATTGGCAA 1609281 Query 420927 TATACCAGAATGATG 420941 || ||||||||||| Sbjct 1609280 TAATCCAGAATGATG 1609266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718222802756