Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 205 1e-47 seq6 111 2e-19 >seq5 Length=1517892 Score = 205 bits (226), Expect = 1e-47 Identities = 1096/1733 (63%), Gaps = 45/1733 (3%) Strand=Plus/Minus Query 109414 TAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG 109473 || |||||||| || || | || |||||| |||| | ||||| || | |||||| Sbjct 776931 TAGTACATACCGGTCTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTA 776872 Query 109474 GAAAGTGTCGGA-CTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACC 109532 | || || |||| ||| | ||||| || ||||| || |||||| | | | Sbjct 776871 CCCATGGTTGGGGCTCTG-ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGC 776813 Query 109533 ACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAA 109592 |||||| || ||||| || ||||| |||||| |||||||| || ||||||||||| Sbjct 776812 ACGATCGGCAGCCATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAA 776753 Query 109593 ATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCAT 109652 | ||| | | | ||||||| | |||||| || || || | | || Sbjct 776752 GTCCTTCAATTGCTTTGGAATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGAT 776693 Query 109653 GAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAACAAG-ATGC 109710 | | | |||||| | | ||||| ||| | | | ||| || |||| ||| Sbjct 776692 GTGGTTCTTCATTGCGTCATCCCAGATACCCAAGTCAACCAAATCACGCAGCAAGTATGG 776633 Query 109711 TTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAG 109770 ||| || | |||||||| ||||| || || |||||| |||| ||||| Sbjct 776632 --GTTCACAATCTGGAATTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTAT 776575 Query 109771 GGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCC 109830 || || ||||| || |||| || | |||||| | || || || || ||||| || || Sbjct 776574 GGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCA 776515 Query 109831 ATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTAC--CCGCTCACGCATTGCGTCCCAAT 109888 | | |||| ||||| | ||| | | | | | ||| | | || |||||||| Sbjct 776514 ACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCTTTC--AATGAGTCCCAAT 776457 Query 109889 CATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAG 109948 | | || | | | || | || || | |||| | || ||| | | |||| || Sbjct 776456 C----CCACAAGTCAGTT--GGCTTACGACCCCAGAGGTCAAATTGCAATTGGCCCTGAG 776403 Query 109949 CAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAG 110008 ||| ||||| || ||| ||||| | || ||| | | |||||||| || | Sbjct 776402 AAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAACTCAACAGAGG 776343 Query 110009 CCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTT 110068 |||| | || | || || ||||| ||||| || || |||| || | | Sbjct 776342 CCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATGTTCAACTCTTTAGCAGCAT 776283 Query 110069 CACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGAC 110128 || | || || || | || | | || || ||||||| || || || ||||| || Sbjct 776282 CAGACTCAAAAGGCATACGTAACATCATGAAGGCATCCGCAAGGCCTTGGACACCAAGGG 776223 Query 110129 CAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGC 110185 |||| || | | |||||||||| ||||| |||| || ||||| | || | Sbjct 776222 CAATTGGTCTGTTTCTCATGTTAGAAGCACGAGC---TTCTGGAACTGGGTAGTAATTTC 776166 Query 110186 GGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGT 110245 |||||||| | || | ||||| || | ||| | || || || | || | | Sbjct 776165 TGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAATATCGTGCAACTTTTGGA 776106 Query 110246 AATCGAACGTTTTCGTCT--CCTT--ATTGACATATT--TG------GGGAGAGCAATAG 110293 | | | |||| ||| || | | ||| | | || || || ||||| | Sbjct 776105 AGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGAAAGCTGGAAGGGCAATGG 776046 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | || | || || |||| | ||||||| | ||| || | ||| || ||||| Sbjct 776045 ATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCACAACACA 775986 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 |||| ||| ||| |||| |||||||||||||||||| || || ||| || ||||| | Sbjct 775985 AGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTT 775926 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACAT 110473 |||| |||||| |||| ||||||||||| ||||||| || | || || | ||| | | Sbjct 775925 TATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCAGAGCT 775866 Query 110474 CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCT 110533 || ||||| | | |||||| | |||||||| || ||||| | | Sbjct 775865 TTTGAGCCTTCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGCTT 775806 Query 110534 CAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACC 110593 ||||||| | || || |||||| | || | |||| | ||| |||| | | || Sbjct 775805 CAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCC 775746 Query 110594 AATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAA 110653 | | || || ||||| | |||||||||||| || |||||||||| || | ||| | Sbjct 775745 ATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACA 775686 Query 110654 GGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATG 110712 ||||| || || |||||| | ||| ||||| | | || | || || | | Sbjct 775685 AATCACGAGCTCTGA-TCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAG 775627 Query 110713 ATATCCGAGTGCCATGGTTCGAGATAGACAGC-GATG-----GATCCCTTACGACGACCC 110766 ||||||| ||||||||| || | || | || ||| | || ||| || || Sbjct 775626 ATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCAC-- 775569 Query 110767 GCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCG 110826 | |||| || || | ||| ||| ||| ||||| | || ||||||||| | |||| Sbjct 775568 -CTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACCATTA 775510 Query 110827 GATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATA 110886 || ||| || ||||| || |||| | | || | ||| || |||| | Sbjct 775509 GAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGTGCAAA 775450 Query 110887 CCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCA 110946 || |||||||| || |||| || ||||| | | | || | || ||||| Sbjct 775449 CCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCT 775390 Query 110947 TCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTT 111006 || || || ||| |||| | |||| || || ||||| |||||||| || | || || Sbjct 775389 TCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTA 775330 Query 111007 CCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTAT 111066 || |||||||| | || || | || || |||| || || |||||| |||||| Sbjct 775329 CCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAA 775270 Query 111067 GTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 || || | |||| | |||| ||||||| ||||| ||||| || ||||| Sbjct 775269 GTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCAT 775217 >seq6 Length=1261692 Score = 111 bits (122), Expect = 2e-19 Identities = 220/321 (69%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 |||||| | || || || ||||| || || |||||| | || || |||||||| Sbjct 182235 CTTACCAATGGCATCGATTTCATCAATAAAAACGATAGATGGGGCATTTTCACGTGCCGT 182294 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 || ||| | ||||| ||||| || ||||||||||| |||||||| || || | || Sbjct 182295 TTTGAATAAATCACGGACACGAGAGGCACCAACACCTACAAACATCTCGACAAACTCTGA 182354 Query 11793 GGCAGAACACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | ||| || |||| || |||||| || |||||||| | || ||| | ||| | Sbjct 182355 ACCTGAA-ACGGAATAAAATGGAACACCAGCTTCACCAGCAGTAGCCTTAGCCAAGAGGG 182413 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| ||||| || | ||| | || | || || | |||||||| |||| ||| Sbjct 182414 TCTTACCGGTACCTGGAGGACCGGAAAGGATTGCACCTCTTGGGATCTTACCACCCAACT 182473 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | | || |||||| || || ||||| ||||| |||| | ||| |||||||| Sbjct 182474 TTTCA--TACTTCTCAGGGTTTTTAAGGAAAGACACAAACTCCATCACTTCTTCCTTGGC 182531 Query 11970 GGAGTCGATACCCTCAACATC 11990 || ||||| ||||||| Sbjct 182532 CTCTTCCATACCTGCAACATC 182552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975948464600