Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3 163 6e-35 seq1 154 3e-32 seq4 131 4e-25 >seq3 Length=2123196 Score = 163 bits (180), Expect = 6e-35 Identities = 175/230 (76%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | ||||||||||||||| ||||| || ||||| || | | ||| Sbjct 1815519 TCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 1815578 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | |||||||| || ||||| | || |||||||||||| || || || Sbjct 1815579 TCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACC 1815638 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||| || || || ||||||||| ||||||||||| || || || || | Sbjct 1815639 CTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAA 1815698 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148 ||||| ||||| ||||| | ||||| ||||| | |||||| | ||||| Sbjct 1815699 GGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCT-TGGTT 1815747 >seq1 Length=2451740 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | ||| | ||| | ||||||||||||||| ||||| || ||||| || | |||| | Sbjct 160693 TCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAG-G 160635 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| ||||| || | |||||||| || ||||| | || |||||||||||| ||||| | Sbjct 160634 TTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATAC 160575 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 | || |||||||| || || |||||| || ||||||||||| || || || || | Sbjct 160574 CCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCA 160515 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||| ||||| || ||||| || || ||||| Sbjct 160514 AGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 160481 Score = 152 bits (168), Expect = 1e-31 Identities = 367/553 (66%), Gaps = 2/553 (0%) Strand=Plus/Minus Query 125148 GATGTTGACAAACGAGCACGGTACAGCATCAAACATCAAGTCGAGAGTAAACAGGCTTTC 125207 ||||||||| | ||| ||||||| || || |||||||||||| | || ||||| || || Sbjct 1146795 GATGTTGACGGATGAGTACGGTACTGCGTCGAACATCAAGTCGCGTGTCAACAGACTGTC 1146736 Query 125208 TGTTCTTGGTGCCATTGTCTCTTGTCAGCAAAAACTCAAACTCTTGACAAAAGTCCCAGA 125267 || ||| || || || |||||| || || || || | ||||| || ||| Sbjct 1146735 GGTGCTTTCGGCGATCACGTCGACTCAGCAGAAGCTGAAGCTGTACACAAAGGTGCCACC 1146676 Query 125268 AAACGGCCTTGTGATTTTCAGTGGCACGGTGATGCTTCCCGAAGGTAAAGAAAAGAAAGT 125327 |||||| | ||||||| | |||| | || ||||||||| || ||||| | Sbjct 1146675 AAACGGGTTGGTGATTTACTGTGGTGATATCATCACGGACGAAGGTAAGGAGAAGAAGCT 1146616 Query 125328 GGCATTTGACGTGGAACCTTTTCGCCCAATCAGCCAAAAGGTGTATGCATGCGACAGCGT 125387 | |||| | || ||||| ||||||| | ||| |||| || || | | Sbjct 1146615 GAACATTGATTTCGAGCCTTTCAAGCCAATCAACACGAAGCTGTACCTGTGTGATAACAA 1146556 Query 125388 CTTCCACACAGAATGCCTCAAAGAGCTCTTGTACGACGACAAAACATACGGTTTTATTAT 125447 |||||||| || ||| ||||| || | | || | | |||||||| || || Sbjct 1146555 GTTCCACACCGAGGCGCTCTCTGAGCTGCTGGAGGCTGATGACAACTACGGTTTCATCAT 1146496 Query 125448 TGTGGATGGTTCAGGGGCTCTGTTCGCGACCCTTTCGGGAAGTACGAGAACCACTCTTTT 125507 |||||||||| || ||||||| | || || || | || | ||| || | Sbjct 1146495 CATGGATGGTTCCGGTTCTCTGTTTGGTTTGCTATCTGGTAACACCCGTACCG-TCATCA 1146437 Query 125508 GTCTTTTCAG-GTATCCCTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTT 125566 |||| || |||||||||||| |||||| | || || ||||||||| |||||| Sbjct 1146436 CCAAGTTCACTGTTGACCTTCCAAAGAAGCACGGCCGTGGTGGTCAATCTGCTGTGCGTT 1146377 Query 125567 TTGAGAGACTTCGAAAAGAAAAGAGACACAACTATTTGAGGAAAGTCGCAGAGAATGCAA 125626 | | ||||| || | || ||||||||||||||| | || || || || ||| ||| Sbjct 1146376 TCGCAAGACTGAGAGAGGAGAAGAGACACAACTATGTTAGAAAGGTTGCTGAGGTTGCCG 1146317 Query 125627 CTCAATGTTTTTTGCAAGACAACAAGTGCAACGTCATTGGGATTGTCATTGCTGGATCGG 125686 ||||||||| | | | ||| |||||| | || ||||| ||||||| || | Sbjct 1146316 TTCAATGTTTCATCACCAATGATAAGGTCAACGTTAACGGTCTTGTCCTTGCTGGTTCTG 1146257 Query 125687 CAGAGTTCAAAAC 125699 |||| ||||| || Sbjct 1146256 CAGACTTCAAGAC 1146244 >seq4 Length=1931745 Score = 131 bits (144), Expect = 4e-25 Identities = 130/166 (78%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | ||| | ||| | ||||||||||||||| |||||||| ||||| || | |||| | Sbjct 933741 TCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAG-G 933799 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| ||||| || | || ||||| ||||| || | || ||| |||||||| ||||| | Sbjct 933800 TTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATAC 933859 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 | || ||||| || || || ||||||||| ||||||||||| || Sbjct 933860 CCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGA 933905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481500493369