Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 seq3 87.8 1e-12 seq1 84.2 1e-11 >seq4 Length=1931745 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 34740 CATATCCAATCATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGA 34799 |||||| ||| | || || ||||| || | ||||||||||| ||| || || ||| Sbjct 933724 CATATCTAATGA---CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGA 933780 Query 34800 ATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGT 34859 ||||| ||||| || | | ||| |||| |||| ||||| || || || || | || | Sbjct 933781 ATGTTGTAGTCAGACAAGGTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTT 933840 Query 34860 TGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||||||||| | || | ||||||||||| Sbjct 933841 TGCTGGTCTGGTGGAATACCCTCCTTGTC 933869 >seq3 Length=2123196 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || | ||||||||||| ||| || || || ||||| ||||| || Sbjct 1815514 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1815573 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | ||| |||| |||| || || |||||||| || | || ||| |||||| | || Sbjct 1815574 AAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGG 1815633 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| ||||| |||||| | || | || || |||||| Sbjct 1815634 ATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACC 1815693 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 || | ||| ||||| || || || || || || || || || ||||| || || Sbjct 1815694 TCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTTGGT 1815746 >seq1 Length=2451740 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || | ||||||||||| ||| || || || ||||| ||||| || Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||| |||||| | || Sbjct 160638 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 160579 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| ||||| | || | ||| || |||||| Sbjct 160578 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACC 160519 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 || | ||| ||||| || || || | ||||| || ||| Sbjct 160518 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAG 160480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633572304696