Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq4 87.8 1e-12
seq3 87.8 1e-12
seq1 84.2 1e-11
>seq4
Length=1931745
Score = 87.8 bits (96), Expect = 1e-12
Identities = 109/149 (73%), Gaps = 3/149 (2%)
Strand=Plus/Plus
Query 34740 CATATCCAATCATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGA 34799
|||||| ||| | || || ||||| || | ||||||||||| ||| || || |||
Sbjct 933724 CATATCTAATGA---CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGA 933780
Query 34800 ATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGT 34859
||||| ||||| || | | ||| |||| |||| ||||| || || || || | || |
Sbjct 933781 ATGTTGTAGTCAGACAAGGTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTT 933840
Query 34860 TGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
||||||||| | || | |||||||||||
Sbjct 933841 TGCTGGTCTGGTGGAATACCCTCCTTGTC 933869
>seq3
Length=2123196
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| || | ||||||||||| ||| || || || ||||| ||||| ||
Sbjct 1815514 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1815573
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| ||| |||| |||| || || |||||||| || | || ||| |||||| | ||
Sbjct 1815574 AAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGG 1815633
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||| ||||| ||||| |||||| | || | || || ||||||
Sbjct 1815634 ATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACC 1815693
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987
|| | ||| ||||| || || || || || || || || || ||||| || ||
Sbjct 1815694 TCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTTGGT 1815746
>seq1
Length=2451740
Score = 84.2 bits (92), Expect = 1e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| || | ||||||||||| ||| || || || ||||| ||||| ||
Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| |||| |||| || || || ||||| || | || ||| |||||| | ||
Sbjct 160638 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 160579
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| ||||| ||||| | || | ||| || ||||||
Sbjct 160578 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACC 160519
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973
|| | ||| ||||| || || || | ||||| || |||
Sbjct 160518 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAG 160480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633572304696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |