Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7 181 9e-40 seq6 158 1e-32 seq1 89.7 4e-12 >seq7 Length=1265681 Score = 181 bits (200), Expect = 9e-40 Identities = 462/694 (67%), Gaps = 23/694 (3%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||| ||| || |||||||| || | | |||||| | | ||| | | || || Sbjct 427024 AGAACAGCTGCAGAGAGAGCCAAGAGAACCTTGTCATCTTCTGCACAAGCTTCAATCGAG 426965 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || ||||| || ||||| || |||| | || ||||| | || |||| ||| ||| Sbjct 426964 ATTGACTCATTGTTCGAGGGTATCGATTTCTACACTTCTATTACTAGAGCCAGATTCGAA 426905 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | |||||||| | || ||| ||| | || ||||| || | ||||| | ||| Sbjct 426904 GAGTTGTGTTCTGAACAATTCAGATCAACTTTGGAGCCAGTGGAGAAGGTTTTGAAGGAT 426845 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| | || ||||| | || | || ||||| ||||||||||| ||||| |||||| Sbjct 426844 GCCAAGTTGGACAAATCTCAGGTTGACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATT 426785 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTAT---TTCAATGGTAAAAAATTAAATGAAAGT 552206 || || |||| ||| || |||| || ||||| ||||| | ||| |||| Sbjct 426784 CCAAAGATTC---AAAAATTGGTTTCTGATTTCTTCAACGGTAAGGAGCCAAA--CAAGT 426730 Query 552207 --GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | || || |||||||||||||| || ||||| || | ||||| ||||| | ||| Sbjct 426729 CCATCAACCCTGATGAGGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCTATCATCACTG 426670 Query 552265 GACAAAC--TGATGAAAAACTACAAAATATTG-TACTTGTAGATGTTACTCCTCTATCTC 552321 | | || | | ||| | | ||| | ||| | ||||| |||| |||| | Sbjct 426669 GTGATACCTCCAACACAAAGACCCAGGACTTGTTGCTTTTGGATGTCGCTCCATTATCCC 426610 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 ||||| | || || | ||| ||||| ||||| || | || ||||| | || || | Sbjct 426609 TTGGTATTGAGACCGCTGGTGGTATCATGACCAAGTTGATTCCAAGAAACTCCACCATCC 426550 Query 552382 CTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 | || || || | | ||| ||||| ||| | ||||| ||| | | ||| ||| Sbjct 426549 CAACAAAGAAGTC-GGAGACTTTCTCTACCTATGCTGATAACCAACCAGGTGTGTTGATT 426491 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTT 552496 ||| | |||||||| || |||| || || ||||| |||||| |||| || Sbjct 426490 CAAGTGTTTGAAGGTGAGAGAACCAGAACCAAGGATAA----CAACTTGTTGGGTAAGTT 426435 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | | | |||||||| ||||| || | || || || || || || ||||| || || Sbjct 426434 TGAGCTTTCTGGTATTCCACCTGCACCAAGAGGTGTTCCACAGATCGAGGTTACCTTTGA 426375 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || ||||||||||| || ||||| || ||||| Sbjct 426374 CATTGATGCCAATGGTATCTTGAACGTATCTGCT 426341 Score = 150 bits (166), Expect = 1e-30 Identities = 370/547 (68%), Gaps = 27/547 (5%) Strand=Plus/Minus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || ||||| || ||||||||||||||||| || || || ||||| | || || Sbjct 427738 GTTGAGATCATTGCAAACGATCAAGGTAACAGAACCACACCTTCCTATGTCGCCTTTACA 427679 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACC 550168 || || || | ||| | |||||||||| ||||| | || || || || || || | Sbjct 427678 GACACGGAGAGATTGA-TTGGTGATGCTGCAAAGAACCAGGCTGCAATG--AACCCAAAG 427622 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | ||||||||||| ||||| ||||| | | || | || | ||| Sbjct 427621 AACACTGTGTTTGATGCTAAGCGTTTGATTGGTCGTAAGTTCGACGACCCAGAAGTTATA 427562 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | ||| ||||| | |||||| | |||||| | || || || | ||||| Sbjct 427561 GAGGATGCTAAGCACTACCCTTTCAAGATTGTTGAACAGGGCGGTAAGCCAAAGATTGAG 427502 Query 550289 GCT-ACTCATGAAGGATCTGTTAAACAA--TTTTCACCA--GAACAAATTTCATCTATGG 550343 | | | | | |||| | | | ||| | |||||| || | || || || |||| Sbjct 427501 GTTGAAT--TCAAGGGTGAG---ACCAAGGTGTTCACCCCTGAGGAGATCTCTTCAATGG 427447 Query 550344 TTTTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 |||| | || ||||| ||||||| || ||||| | ||| | || | |||||| Sbjct 427446 TTTTGACAAAGATGAAGGAAACAGCTGAGAACTTTT-TGGGTAGCGCCGTGAAGGATGCC 427388 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || || || || || || || ||||| || || ||| | |||||||| |||||||| || Sbjct 427387 GTCATCACGGTGCCGGCCTACTTTAACGATTCTCAAAGACAAGCTACCAAAGATGCCGGT 427328 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 |||||||| | || ||||||||||| || || ||||| ||||| || ||| ||||| Sbjct 427327 TTGATTGCTGGTTTGAACGTTCTTCGTATCATTAACGAACCAACTGCAGCAGCAATTGCA 427268 Query 550523 TATGGACTTGATAAACATAATGATCAA---GAACTTAATGTACTCATCTTTGATT---GT 550576 || || | || | | || | |||| |||| || || || ||||| |||| || Sbjct 427267 TACGGTTTGGACA---AGAAGGGTCAAAGTGAACACAACGTCCTTATCTTCGATTTGGGT 427211 Query 550577 GGAGGTA 550583 || |||| Sbjct 427210 GGTGGTA 427204 >seq6 Length=1261692 Score = 158 bits (174), Expect = 1e-32 Identities = 330/483 (68%), Gaps = 14/483 (3%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || ||||| || ||||||||||||||||| ||||| || | ||| | ||||| Sbjct 51101 GTTGAGATCATTGCTAACGATCAAGGTAACAGAACCACTCCTTCCTTTGTCGCCTTCACC 51160 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | ||| | |||||||||| || || | ||||| || || || | || Sbjct 51161 GACACTGAGAGATTGA-TTGGTGATGCCGCTAAGAACCAAGCTGCTATGAACCCAGCAAA 51219 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | ||||| ||||| ||||| ||||| |||| ||| | ||| | || || | Sbjct 51220 CACCGTCTTTGACGCTAAGCGTTTGATTGGTAGAAAGTTTGACGATGCAGAGGTCCAAAC 51279 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||||| ||||| | || ||| | || | || | | ||| || || | || ||| Sbjct 51280 TGATATCAAGCACTTCCCATTCAAGGTTATCAACGATGGTGGTAAGCCAAAGATCCAAGT 51339 Query 550291 T--ACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTATGGT 550344 | | ||| |||| || | ||| |||||| |||||| | || || || ||||| Sbjct 51340 TGAATTCA--AAGG---TG-AGACCAAGGTTTTCACCCCAGAAGAGATCTCCTCCATGGT 51393 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| | || ||||| |||| || | ||| | ||| || |||| |||||| || Sbjct 51394 TTTGCTTAAGATGAAGGAAACCGCTGAGGGTTTCTTGGGTACTGAGGTTAAGGATGCCGT 51453 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || ||||| || || || || || ||| | |||||||| || |||||||| Sbjct 51454 TGTCACCGTTCCAGCTTACTTCAACGATTCTCAAAGACAAGCTACAAAGGATGCTGGTTT 51513 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||| |||| | || | | ||||| ||||| || || || |||||||| |||| || Sbjct 51514 GATTTCTGGTTTGAACATCTTGCGTATCATCAACGAGCCAACCGCTGCTGCCATTGCTTA 51573 Query 550525 TGG 550527 || Sbjct 51574 CGG 51576 Score = 156 bits (172), Expect = 3e-32 Identities = 450/684 (66%), Gaps = 20/684 (3%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||| || ||||| || || | | || ||| | ||||| | ||||||| Sbjct 51815 AGAACTGCTGCTGAGAGAGCTAAGAGAACCTTGTCTTCTTCTGCTCAAGCTTCTATTGAG 51874 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | ||||| || | || || ||||| | | || |||| | || || | ||| ||| Sbjct 51875 ATTGATTCCTTGTACGAAGGTATTGACTTCTACACCTCTATCACCAGAGCTAGATTCGAA 51934 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || ||||| || | | || ||| || | || ||||| || | ||||| |||||| Sbjct 51935 GAGCTTTGTGCTTCTATGTTCAGATCCACTTTGGAGCCAGTTGAGAAGGTTTTGAGAGAT 51994 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | | ||||| ||| |||| || || ||||| ||||| ||||| ||||| |||||| Sbjct 51995 GCCGGTTTGGATAAGTCCCAAGTTCACGAGATTGTCCTTGTCGGTGGTTCTACCAGAATT 52054 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || ||| ||| | | ||| | ||| || ||||| | ||| | Sbjct 52055 CCAAAGGTTC---AAAAGCTCGTCTCTGAGTTCTTCAACGGTAAGGAGCCAAACAGATCC 52111 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG-- 552264 | || ||||||||||||||||| || ||||| || | ||||| ||||| | | | Sbjct 52112 ATCAACCCAGATGAGGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCTATCTTGACCGGT 52171 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 ||| || | | || ||| ||| | | | ||| | |||||| |||| | || |||| Sbjct 52172 GACCAA-TCTTCCAAGACT-CAAGACTTGTTGCTTTTGGATGTTGCTCCATTGTCCCTTG 52229 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 || | || || | ||| ||| | ||||| || | || ||||| | || ||||| Sbjct 52230 GTATTGAGACCGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCCACCATTCCAA 52289 Query 552385 GTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 ||| || ||| | | ||| || || || | || || ||| | | ||| |||||| Sbjct 52290 CTAAGAAGTCT-GAGACTTTCTCCACCTACGCTGACAACCAACCAGGTGTCTTGATTCAA 52348 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAA 552499 | |||||||| |||||| || ||||| || |||||| |||| ||| | Sbjct 52349 GTGTTTGAAGGTGAAAGAGCTAGAACAAAAGACAA----CAACTTGTTGGGTAAGTTTGA 52404 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 | |||||||| ||||| || | || || || |||||||| ||||| || || | Sbjct 52405 GCTTTCCGGTATTCCACCTGCACCAAGAGGTGTTCCACAAATTGAGGTTACCTTTGACGT 52464 Query 552560 CGATGCCAATGGAATTTTGAATGT 552583 |||||||| || || ||||| || Sbjct 52465 TGATGCCAACGGTATCTTGAACGT 52488 >seq1 Length=2451740 Score = 89.7 bits (98), Expect = 4e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | ||| || | || || ||||||||||| | || ||||| | | || || Sbjct 491109 TTTGCTCCACAAGAGATCTCCTCTATGGTTTTGACCAAGATGAAGGAGATTGCTGAGGCC 491168 Query 550376 TTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 |||||||| | ||| | | || || || ||||| ||||| || || || ||| | Sbjct 491169 AAGATTGGTCAAAAGGTTGAGAAGGCTGTTATTACTGTTCCAGCTTACTTCAACGACGCT 491228 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 ||||||||||| || || |||||||| ||||| || | || ||| | ||||| || Sbjct 491229 CAACGTCAAGCCACCAAGGATGCTGGTGCCATTGCCGGTTTGAACGTTTTGCGTATCATT 491288 Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || || || ||||| ||||| |||| || || Sbjct 491289 AACGAGCCAACTGCCGCTGCCATTGCTTACGG 491320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295629808430