Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq7 181 9e-40
seq6 158 1e-32
seq1 89.7 4e-12
>seq7
Length=1265681
Score = 181 bits (200), Expect = 9e-40
Identities = 462/694 (67%), Gaps = 23/694 (3%)
Strand=Plus/Minus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
||||| ||| || |||||||| || | | |||||| | | ||| | | || ||
Sbjct 427024 AGAACAGCTGCAGAGAGAGCCAAGAGAACCTTGTCATCTTCTGCACAAGCTTCAATCGAG 426965
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
| || ||||| || ||||| || |||| | || ||||| | || |||| ||| |||
Sbjct 426964 ATTGACTCATTGTTCGAGGGTATCGATTTCTACACTTCTATTACTAGAGCCAGATTCGAA 426905
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089
|| | |||||||| | || ||| ||| | || ||||| || | ||||| | |||
Sbjct 426904 GAGTTGTGTTCTGAACAATTCAGATCAACTTTGGAGCCAGTGGAGAAGGTTTTGAAGGAT 426845
Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149
| ||| | || ||||| | || | || ||||| ||||||||||| ||||| ||||||
Sbjct 426844 GCCAAGTTGGACAAATCTCAGGTTGACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATT 426785
Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTAT---TTCAATGGTAAAAAATTAAATGAAAGT 552206
|| || |||| ||| || |||| || ||||| ||||| | ||| ||||
Sbjct 426784 CCAAAGATTC---AAAAATTGGTTTCTGATTTCTTCAACGGTAAGGAGCCAAA--CAAGT 426730
Query 552207 --GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264
| || || |||||||||||||| || ||||| || | ||||| ||||| | |||
Sbjct 426729 CCATCAACCCTGATGAGGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCTATCATCACTG 426670
Query 552265 GACAAAC--TGATGAAAAACTACAAAATATTG-TACTTGTAGATGTTACTCCTCTATCTC 552321
| | || | | ||| | | ||| | ||| | ||||| |||| |||| |
Sbjct 426669 GTGATACCTCCAACACAAAGACCCAGGACTTGTTGCTTTTGGATGTCGCTCCATTATCCC 426610
Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381
||||| | || || | ||| ||||| ||||| || | || ||||| | || || |
Sbjct 426609 TTGGTATTGAGACCGCTGGTGGTATCATGACCAAGTTGATTCCAAGAAACTCCACCATCC 426550
Query 552382 CTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440
| || || || | | ||| ||||| ||| | ||||| ||| | | ||| |||
Sbjct 426549 CAACAAAGAAGTC-GGAGACTTTCTCTACCTATGCTGATAACCAACCAGGTGTGTTGATT 426491
Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTT 552496
||| | |||||||| || |||| || || ||||| |||||| |||| ||
Sbjct 426490 CAAGTGTTTGAAGGTGAGAGAACCAGAACCAAGGATAA----CAACTTGTTGGGTAAGTT 426435
Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556
| | | |||||||| ||||| || | || || || || || || ||||| || ||
Sbjct 426434 TGAGCTTTCTGGTATTCCACCTGCACCAAGAGGTGTTCCACAGATCGAGGTTACCTTTGA 426375
Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590
|| ||||||||||| || ||||| || |||||
Sbjct 426374 CATTGATGCCAATGGTATCTTGAACGTATCTGCT 426341
Score = 150 bits (166), Expect = 1e-30
Identities = 370/547 (68%), Gaps = 27/547 (5%)
Strand=Plus/Minus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || ||||| || ||||||||||||||||| || || || ||||| | || ||
Sbjct 427738 GTTGAGATCATTGCAAACGATCAAGGTAACAGAACCACACCTTCCTATGTCGCCTTTACA 427679
Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACC 550168
|| || || | ||| | |||||||||| ||||| | || || || || || || |
Sbjct 427678 GACACGGAGAGATTGA-TTGGTGATGCTGCAAAGAACCAGGCTGCAATG--AACCCAAAG 427622
Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228
|| ||| | ||||||||||| ||||| ||||| | | || | || | |||
Sbjct 427621 AACACTGTGTTTGATGCTAAGCGTTTGATTGGTCGTAAGTTCGACGACCCAGAAGTTATA 427562
Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288
| ||| ||||| | |||||| | |||||| | || || || | |||||
Sbjct 427561 GAGGATGCTAAGCACTACCCTTTCAAGATTGTTGAACAGGGCGGTAAGCCAAAGATTGAG 427502
Query 550289 GCT-ACTCATGAAGGATCTGTTAAACAA--TTTTCACCA--GAACAAATTTCATCTATGG 550343
| | | | | |||| | | | ||| | |||||| || | || || || ||||
Sbjct 427501 GTTGAAT--TCAAGGGTGAG---ACCAAGGTGTTCACCCCTGAGGAGATCTCTTCAATGG 427447
Query 550344 TTTTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402
|||| | || ||||| ||||||| || ||||| | ||| | || | ||||||
Sbjct 427446 TTTTGACAAAGATGAAGGAAACAGCTGAGAACTTTT-TGGGTAGCGCCGTGAAGGATGCC 427388
Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462
|| || || || || || || ||||| || || ||| | |||||||| |||||||| ||
Sbjct 427387 GTCATCACGGTGCCGGCCTACTTTAACGATTCTCAAAGACAAGCTACCAAAGATGCCGGT 427328
Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522
|||||||| | || ||||||||||| || || ||||| ||||| || ||| |||||
Sbjct 427327 TTGATTGCTGGTTTGAACGTTCTTCGTATCATTAACGAACCAACTGCAGCAGCAATTGCA 427268
Query 550523 TATGGACTTGATAAACATAATGATCAA---GAACTTAATGTACTCATCTTTGATT---GT 550576
|| || | || | | || | |||| |||| || || || ||||| |||| ||
Sbjct 427267 TACGGTTTGGACA---AGAAGGGTCAAAGTGAACACAACGTCCTTATCTTCGATTTGGGT 427211
Query 550577 GGAGGTA 550583
|| ||||
Sbjct 427210 GGTGGTA 427204
>seq6
Length=1261692
Score = 158 bits (174), Expect = 1e-32
Identities = 330/483 (68%), Gaps = 14/483 (3%)
Strand=Plus/Plus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || ||||| || ||||||||||||||||| ||||| || | ||| | |||||
Sbjct 51101 GTTGAGATCATTGCTAACGATCAAGGTAACAGAACCACTCCTTCCTTTGTCGCCTTCACC 51160
Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| ||||| | ||| | |||||||||| || || | ||||| || || || | ||
Sbjct 51161 GACACTGAGAGATTGA-TTGGTGATGCCGCTAAGAACCAAGCTGCTATGAACCCAGCAAA 51219
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230
|| | ||||| ||||| ||||| ||||| |||| ||| | ||| | || || |
Sbjct 51220 CACCGTCTTTGACGCTAAGCGTTTGATTGGTAGAAAGTTTGACGATGCAGAGGTCCAAAC 51279
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290
||||| ||||| | || ||| | || | || | | ||| || || | || |||
Sbjct 51280 TGATATCAAGCACTTCCCATTCAAGGTTATCAACGATGGTGGTAAGCCAAAGATCCAAGT 51339
Query 550291 T--ACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTATGGT 550344
| | ||| |||| || | ||| |||||| |||||| | || || || |||||
Sbjct 51340 TGAATTCA--AAGG---TG-AGACCAAGGTTTTCACCCCAGAAGAGATCTCCTCCATGGT 51393
Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404
||| | || ||||| |||| || | ||| | ||| || |||| |||||| ||
Sbjct 51394 TTTGCTTAAGATGAAGGAAACCGCTGAGGGTTTCTTGGGTACTGAGGTTAAGGATGCCGT 51453
Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464
| || || ||||| || || || || || ||| | |||||||| || ||||||||
Sbjct 51454 TGTCACCGTTCCAGCTTACTTCAACGATTCTCAAAGACAAGCTACAAAGGATGCTGGTTT 51513
Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524
||| |||| | || | | ||||| ||||| || || || |||||||| |||| ||
Sbjct 51514 GATTTCTGGTTTGAACATCTTGCGTATCATCAACGAGCCAACCGCTGCTGCCATTGCTTA 51573
Query 550525 TGG 550527
||
Sbjct 51574 CGG 51576
Score = 156 bits (172), Expect = 3e-32
Identities = 450/684 (66%), Gaps = 20/684 (3%)
Strand=Plus/Plus
Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969
||||||||| || ||||| || || | | || ||| | ||||| | |||||||
Sbjct 51815 AGAACTGCTGCTGAGAGAGCTAAGAGAACCTTGTCTTCTTCTGCTCAAGCTTCTATTGAG 51874
Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029
| ||||| || | || || ||||| | | || |||| | || || | ||| |||
Sbjct 51875 ATTGATTCCTTGTACGAAGGTATTGACTTCTACACCTCTATCACCAGAGCTAGATTCGAA 51934
Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089
|| ||||| || | | || ||| || | || ||||| || | ||||| ||||||
Sbjct 51935 GAGCTTTGTGCTTCTATGTTCAGATCCACTTTGGAGCCAGTTGAGAAGGTTTTGAGAGAT 51994
Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149
| | ||||| ||| |||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct 51995 GCCGGTTTGGATAAGTCCCAAGTTCACGAGATTGTCCTTGTCGGTGGTTCTACCAGAATT 52054
Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206
|| || ||| ||| | | ||| | ||| || ||||| | ||| |
Sbjct 52055 CCAAAGGTTC---AAAAGCTCGTCTCTGAGTTCTTCAACGGTAAGGAGCCAAACAGATCC 52111
Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG-- 552264
| || ||||||||||||||||| || ||||| || | ||||| ||||| | | |
Sbjct 52112 ATCAACCCAGATGAGGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCTATCTTGACCGGT 52171
Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324
||| || | | || ||| ||| | | | ||| | |||||| |||| | || ||||
Sbjct 52172 GACCAA-TCTTCCAAGACT-CAAGACTTGTTGCTTTTGGATGTTGCTCCATTGTCCCTTG 52229
Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384
|| | || || | ||| ||| | ||||| || | || ||||| | || |||||
Sbjct 52230 GTATTGAGACCGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCCACCATTCCAA 52289
Query 552385 GTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443
||| || ||| | | ||| || || || | || || ||| | | ||| ||||||
Sbjct 52290 CTAAGAAGTCT-GAGACTTTCTCCACCTACGCTGACAACCAACCAGGTGTCTTGATTCAA 52348
Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAA 552499
| |||||||| |||||| || ||||| || |||||| |||| ||| |
Sbjct 52349 GTGTTTGAAGGTGAAAGAGCTAGAACAAAAGACAA----CAACTTGTTGGGTAAGTTTGA 52404
Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559
| |||||||| ||||| || | || || || |||||||| ||||| || || |
Sbjct 52405 GCTTTCCGGTATTCCACCTGCACCAAGAGGTGTTCCACAAATTGAGGTTACCTTTGACGT 52464
Query 552560 CGATGCCAATGGAATTTTGAATGT 552583
|||||||| || || ||||| ||
Sbjct 52465 TGATGCCAACGGTATCTTGAACGT 52488
>seq1
Length=2451740
Score = 89.7 bits (98), Expect = 4e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375
||| | ||| || | || || ||||||||||| | || ||||| | | || ||
Sbjct 491109 TTTGCTCCACAAGAGATCTCCTCTATGGTTTTGACCAAGATGAAGGAGATTGCTGAGGCC 491168
Query 550376 TTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435
|||||||| | ||| | | || || || ||||| ||||| || || || ||| |
Sbjct 491169 AAGATTGGTCAAAAGGTTGAGAAGGCTGTTATTACTGTTCCAGCTTACTTCAACGACGCT 491228
Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495
||||||||||| || || |||||||| ||||| || | || ||| | ||||| ||
Sbjct 491229 CAACGTCAAGCCACCAAGGATGCTGGTGCCATTGCCGGTTTGAACGTTTTGCGTATCATT 491288
Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGG 550527
|| || || ||||| ||||| |||| || ||
Sbjct 491289 AACGAGCCAACTGCCGCTGCCATTGCTTACGG 491320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295629808430
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