Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 seq3 95.1 1e-14 >seq1 Length=2451740 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | | ||| || ||||| || || || ||||| || ||||| || | Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 160638 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 160579 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || ||||| || || || ||| | || | |||||||| | || || Sbjct 160578 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACC 160519 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | || | || || ||||| || || || || || Sbjct 160518 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 160481 >seq3 Length=2123196 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | | ||| || ||||| || || || ||||| || ||||| || | Sbjct 1815514 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1815573 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 1815574 AAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGG 1815633 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| || || || || || || | || | ||||| || | || || Sbjct 1815634 ATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACC 1815693 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || || || | ||||| || || || ||||| Sbjct 1815694 TCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCAT 1815740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278366192499