Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
seq1 82.4 6e-11
>seq3
Length=2123196
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| ||||| || ||||| ||||| | | ||| | | || |||
Sbjct 1815532 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 1815591
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
|| |||||||||||||| |||| || ||||| || | || | ||||| |||||
Sbjct 1815592 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTGG 1815651
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || || | ||| ||||||| ||||| || ||
Sbjct 1815652 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAAGGTAATGGTCTTA 1815711
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || | ||||| || ||||| |||||| ||
Sbjct 1815712 CCTGTAAGGGTTTTGACGAAAATTTGCATCTTG 1815744
>seq1
Length=2451740
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| ||||| || ||||| ||||| | ||| | || |||
Sbjct 160680 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCCTCC 160621
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
|| |||||||| ||||| |||| || ||||| || | |||| |||||||||||
Sbjct 160620 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 160561
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | | || || | ||| ||||||| ||||| || ||
Sbjct 160560 ATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTA 160501
Query 48738 CCCGTCAAAGTTTTTACAAA 48757
|| ||||| || || || ||
Sbjct 160500 CCGGTCAAGGTCTTAACGAA 160481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937567501261
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |