Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 seq1 82.4 6e-11 >seq3 Length=2123196 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| ||||| || ||||| ||||| | | ||| | | || ||| Sbjct 1815532 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 1815591 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || |||||||||||||| |||| || ||||| || | || | ||||| ||||| Sbjct 1815592 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTGG 1815651 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||| ||||||| ||||| || || Sbjct 1815652 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAAGGTAATGGTCTTA 1815711 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || | ||||| || ||||| |||||| || Sbjct 1815712 CCTGTAAGGGTTTTGACGAAAATTTGCATCTTG 1815744 >seq1 Length=2451740 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| ||||| || ||||| ||||| | ||| | || ||| Sbjct 160680 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCCTCC 160621 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || |||||||| ||||| |||| || ||||| || | |||| ||||||||||| Sbjct 160620 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 160561 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || | ||| ||||||| ||||| || || Sbjct 160560 ATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTA 160501 Query 48738 CCCGTCAAAGTTTTTACAAA 48757 || ||||| || || || || Sbjct 160500 CCGGTCAAGGTCTTAACGAA 160481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937567501261