Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5 167 1e-36
seq4 141 5e-29
>seq5
Length=1517892
Score = 167 bits (184), Expect = 1e-36
Identities = 235/330 (71%), Gaps = 0/330 (0%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||| |||||||| ||| ||| | || || ||||| || ||| || | ||||||
Sbjct 775765 ATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGG 775706
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||||| || || ||||| | ||||| || ||||| || ||||| |||||| |
Sbjct 775705 AATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCT 775646
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| ||| | ||||||||| ||||| | ||||||||| || || || | ||||| |||
Sbjct 775645 GATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACC 775586
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| ||| || |||||||| || |||||||||||||| | ||| || || | |||
Sbjct 775585 TGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCAT 775526
Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
|||| || ||| | || ||||| || | | || | ||| ||||| ||| ||
Sbjct 775525 AGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGAT 775466
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGC 26217
|| |||| || | |||||| ||||||||
Sbjct 775465 ATTGTGAATGTGCAAACCGATACCACCAGC 775436
Score = 93.3 bits (102), Expect = 2e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108
|| |||||| |||| ||||||||||| || | || ||||||||||| ||||| || |||
Sbjct 776586 TTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTT 776527
Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168
|||||| ||| | || || || ||||||| |||||| || ||| || ||| |||
Sbjct 776526 GGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCTTTCAAT 776467
Query 25169 TTATCCCAATC 25179
||||||||
Sbjct 776466 GAGTCCCAATC 776456
>seq4
Length=1931745
Score = 141 bits (156), Expect = 5e-29
Identities = 204/286 (71%), Gaps = 4/286 (1%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||| | || ||| || |||| | | ||||| |||||||| | ||| || |||
Sbjct 969436 GGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATC 969377
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|||| ||||| || | |||||| |||| || ||| || || || || ||||| |||
Sbjct 969376 CACAAGGCATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGA 969317
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTT- 26070
|| | ||| ||||| | ||| | ||||||||||| || || || ||||| |||
Sbjct 969316 TCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGC 969257
Query 26071 -TCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||| |||| |||||||||| || || || || || | || || ||| |||||||||
Sbjct 969256 CTCTTATTCC--CACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATTG 969199
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCC 26175
|||||| |||| | ||| || ||||| | | || | ||||||
Sbjct 969198 GAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGATCC 969153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039978412525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |