Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 167 1e-36 seq4 141 5e-29 >seq5 Length=1517892 Score = 167 bits (184), Expect = 1e-36 Identities = 235/330 (71%), Gaps = 0/330 (0%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||||||| ||| ||| | || || ||||| || ||| || | |||||| Sbjct 775765 ATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGG 775706 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| || || ||||| | ||||| || ||||| || ||||| |||||| | Sbjct 775705 AATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCT 775646 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | ||||||||| ||||| | ||||||||| || || || | ||||| ||| Sbjct 775645 GATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACC 775586 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || |||||||| || |||||||||||||| | ||| || || | ||| Sbjct 775585 TGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCAT 775526 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 |||| || ||| | || ||||| || | | || | ||| ||||| ||| || Sbjct 775525 AGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGAT 775466 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGC 26217 || |||| || | |||||| |||||||| Sbjct 775465 ATTGTGAATGTGCAAACCGATACCACCAGC 775436 Score = 93.3 bits (102), Expect = 2e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108 || |||||| |||| ||||||||||| || | || ||||||||||| ||||| || ||| Sbjct 776586 TTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTT 776527 Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168 |||||| ||| | || || || ||||||| |||||| || ||| || ||| ||| Sbjct 776526 GGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCTTTCAAT 776467 Query 25169 TTATCCCAATC 25179 |||||||| Sbjct 776466 GAGTCCCAATC 776456 >seq4 Length=1931745 Score = 141 bits (156), Expect = 5e-29 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| |||| | || ||| || |||| | | ||||| |||||||| | ||| || ||| Sbjct 969436 GGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATC 969377 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 |||| ||||| || | |||||| |||| || ||| || || || || ||||| ||| Sbjct 969376 CACAAGGCATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGA 969317 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTT- 26070 || | ||| ||||| | ||| | ||||||||||| || || || ||||| ||| Sbjct 969316 TCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGC 969257 Query 26071 -TCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||| |||| |||||||||| || || || || || | || || ||| ||||||||| Sbjct 969256 CTCTTATTCC--CACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATTG 969199 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCC 26175 |||||| |||| | ||| || ||||| | | || | |||||| Sbjct 969198 GAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGATCC 969153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039978412525