Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 9e-26
seq1 102 1e-16
seq4 86.0 1e-11
>seq3
Length=2123196
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| || |||| || | || | ||| || || || ||||| ||
Sbjct 1815513 ACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGA 1815572
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || |||||||| || ||||| ||||| || || ||
Sbjct 1815573 CAAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGG 1815632
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| || ||||| || || || |||| || | || ||| || ||||| ||||||||
Sbjct 1815633 GATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAAC 1815692
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| | || || || |||||||| || ||||| || || |||||||| ||
Sbjct 1815693 CTCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTT 1815743
>seq1
Length=2451740
Score = 102 bits (112), Expect = 1e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| || |||| || | || | ||| || || || |||||
Sbjct 160701 ATACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCA 160642
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || ||||| ||| || ||||| || || ||||| || ||||| ||||| || ||
Sbjct 160641 GACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 160582
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || || ||||| || |||| || | ||| ||| || || || ||||||
Sbjct 160581 GGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCA 160522
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
|| || | || || || ||||| ||
Sbjct 160521 ACCTCCAAGGTAATGGTCTTACCGGT 160496
>seq4
Length=1931745
Score = 86.0 bits (94), Expect = 1e-11
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| ||| |||| || | || | ||| || ||| || ||||| ||
Sbjct 933735 ACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 933794
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| ||||| ||| || |||||||| || || ||||| ||||| || || || || ||
Sbjct 933795 CAAGGTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGG 933854
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| || || || || || || |||| || | || ||| || || || || |||||
Sbjct 933855 AATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGATTCAAC 933914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654321280240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |