Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq6 107 3e-18
seq1 102 1e-16
>seq6
Length=1261692
Score = 107 bits (118), Expect = 3e-18
Identities = 352/541 (65%), Gaps = 7/541 (1%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||| ||| | || ||||| |||||||| || || | | || ||
Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATAA 38950
| |||||| || ||||| ||| | || || | || | | || ||| | || |
Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCT-TGTTACCAAGTGCAACGAG 58680
Query 38951 TAATCTATCGGCCACAAATTC-AACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|||||||| || ||| | || ||| ||||| |||| || | ||| ||||||||||| |
Sbjct 58679 CAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGA 58621
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
||| | ||||| || | ||| ||| || || ||||||| | || |
Sbjct 58620 GAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGA 58561
Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129
| | | | | | | || | || | || | || ||| | | ||||| |
Sbjct 58560 TTCTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGG---GCAAACAACAAACAAG 58504
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
| ||||| || |||||||||||||| | | || || || ||| || || || ||||
Sbjct 58503 CGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTG 58444
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249
|||| || |||||||| || | |||||| || || || || || || ||||| ||||
Sbjct 58443 GCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATAC 58384
Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCC 39309
| || ||| ||||| || | | ||| || |||| | | |||||| |||||
Sbjct 58383 CTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCC 58324
Query 39310 AATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 39369
| | | |||||||| || || || |||||| | || || |||| || || || || |
Sbjct 58323 ATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACA 58264
Query 39370 A 39370
|
Sbjct 58263 A 58263
>seq1
Length=2451740
Score = 102 bits (112), Expect = 1e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || | || || || | ||| | ||| || || || ||
Sbjct 160704 ATGATACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAG 160645
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || | || |||||||| ||||||||||| || ||||| ||||||||
Sbjct 160644 TCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCT 160585
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || || || || ||||| || || || ||||| || || || || ||
Sbjct 160584 GGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGAC 160525
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| || || | |||||||| ||||| || || || |||| |||
Sbjct 160524 TCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 160481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135920800600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |