Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq6 107 3e-18 seq1 102 1e-16 >seq6 Length=1261692 Score = 107 bits (118), Expect = 3e-18 Identities = 352/541 (65%), Gaps = 7/541 (1%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| ||||| ||| | || ||||| |||||||| || || | | || || Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATAA 38950 | |||||| || ||||| ||| | || || | || | | || ||| | || | Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCT-TGTTACCAAGTGCAACGAG 58680 Query 38951 TAATCTATCGGCCACAAATTC-AACATATTGTAACATTAATTCACAATTCATACCCAATA 39009 |||||||| || ||| | || ||| ||||| |||| || | ||| ||||||||||| | Sbjct 58679 CAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGA 58621 Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069 ||| | ||||| || | ||| ||| || || ||||||| | || | Sbjct 58620 GAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGA 58561 Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129 | | | | | | | || | || | || | || ||| | | ||||| | Sbjct 58560 TTCTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGG---GCAAACAACAAACAAG 58504 Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189 | ||||| || |||||||||||||| | | || || || ||| || || || |||| Sbjct 58503 CGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTG 58444 Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249 |||| || |||||||| || | |||||| || || || || || || ||||| |||| Sbjct 58443 GCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATAC 58384 Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCC 39309 | || ||| ||||| || | | ||| || |||| | | |||||| ||||| Sbjct 58383 CTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCC 58324 Query 39310 AATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 39369 | | | |||||||| || || || |||||| | || || |||| || || || || | Sbjct 58323 ATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACA 58264 Query 39370 A 39370 | Sbjct 58263 A 58263 >seq1 Length=2451740 Score = 102 bits (112), Expect = 1e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || | || || || | ||| | ||| || || || || Sbjct 160704 ATGATACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAG 160645 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || | || |||||||| ||||||||||| || ||||| |||||||| Sbjct 160644 TCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCT 160585 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || || || || ||||| || || || ||||| || || || || || Sbjct 160584 GGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGAC 160525 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || || || | |||||||| ||||| || || || |||| ||| Sbjct 160524 TCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 160481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135920800600