Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7 141 3e-28 seq5 100 8e-16 seq1 98.7 3e-15 >seq7 Length=1265681 Score = 141 bits (156), Expect = 3e-28 Identities = 228/326 (70%), Gaps = 4/326 (1%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| | ||| || ||||||| ||||| | |||||| |||||||||||||| Sbjct 1008257 ATCATAATGGACCATGATATCTTCCAAGGCCTTGACAAGACGACGTTGAATATAACCAGT 1008316 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | || ||| || || || |||||||| | ||| |||||||||||||||| |||||| | Sbjct 1008317 TTCAGCTGTCTTCACGGCAGTATCAATCAAACCCTCACGACCACCCATAGCGTGGAAGTA 1008376 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | |||| ||| | || | | | | ||| | || |||||||| | ||| || Sbjct 1008377 GAATTCTTGTGGTGTCAATCCTCTTAAATAAGAGTTTTCGACGAAACCCTTTGACTCTGG 1008436 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 || | || ||||| ||||||||||| ||| | || || ||||||| | ||||| Sbjct 1008437 AGAGTAATCATCCTTGGAAAAGTGTGGCAAGGTACGGTCAGCAAAGCCGTAAGCAATACG 1008496 Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACT 302852 || || ||||| ||| || |||| || | |||||| | ||| || ||| | Sbjct 1008497 TTTACCTTCAACCGACTGTTGGCCCACACAAGCGGACATCTGGGCAATGTT--AATGAAA 1008554 Query 302853 G--CCCTTGGAGCCAGCATTTACCAT 302876 | |||||||| |||||| | ||||| Sbjct 1008555 GAACCCTTGGAACCAGCACTCACCAT 1008580 Score = 122 bits (134), Expect = 3e-22 Identities = 112/141 (79%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||||| | ||| ||||||||| || || || |||||| || |||||||| Sbjct 1007501 CAAAATTTCTTTCAAACGAGGAACACCAGATGTAACCTT---CTTGGAAGCCACACCAGC 1007557 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||||||||||| || | |||||||| ||||||||||||| ||| || || | Sbjct 1007558 AAAGTGGAAAGTATTCAAGGTCATTTGAGTAGCTGGCTCACCAATAGATTGAGCGGCCAC 1007617 Query 301932 CATACCAACCATTTCTCCTGG 301952 ||||||||||| || ||||| Sbjct 1007618 AATACCAACCATCTCACCTGG 1007638 >seq5 Length=1517892 Score = 100 bits (110), Expect = 8e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || ||||||||||| |||| ||| ||| ||||||| | || || |||||||| || Sbjct 776008 GTACTCGACAATCTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATT 775949 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || || ||||||||||||| || || || ||| |||| || || || || ||||||| Sbjct 775948 GGACTTTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGC 775889 Query 155750 GTCCA 155754 |||| Sbjct 775888 CTCCA 775884 >seq1 Length=2451740 Score = 98.7 bits (108), Expect = 3e-15 Identities = 218/325 (67%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||| |||||||| ||||| ||||| || | || || | |||| ||| ||| Sbjct 769344 CTTTCTTTACCAATGGCATCGATTTCATCGACAAAGATGATTGCTGGAGCCATTTTTCTA 769403 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 ||| || ||||| || | ||||| || || || | ||| ||| |||| || ||||| Sbjct 769404 GCAGTTTTGAATAAGTCACGAACACGAGAGGCACCGACACCGACAAACATCTCAACAAAC 769463 Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200 |||||| | || || | ||| | ||| ||||| || || ||| |||||| Sbjct 769464 TCAGAACCAGAAACCGAGAGGAAAGGGACACCGGCTTCACCAGCCGTGGCCTTCGCCAAC 769523 Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 | |||||||| || || |||||||| ||| | | || |||| | ||||| || Sbjct 769524 AAGGTCTTACCGGTACCTGGTGGTCCAGATAAAATGGCACCTCTTGGAATCTTTGCACC- 769582 Query 289261 GCAGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATT 289318 || ||| ||| || ||||| | || || ||||| |||| |||| || || | | Sbjct 769583 -CAATCTTTCATACTTTTCAGGACGTTTCAAGAATTCAACAAATTCCATAATCTCCTCCT 769641 Query 289319 TTGCCTCATCACATCCTGCTACATC 289343 | ||||||||||| || || || || Sbjct 769642 TGGCCTCATCACAACCGGCAACGTC 769666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817467996359