Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 2e-25
seq5 120 3e-22
seq1 116 3e-21
seq4 96.9 3e-15
>seq3
Length=2123196
Score = 131 bits (144), Expect = 2e-25
Identities = 183/257 (71%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | ||||| || || ||||| || ||||| | || || || || |
Sbjct 1815741 GATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCCTC 1815682
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| |||||||| || || || || || ||
Sbjct 1815681 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCA 1815622
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | |||||||||||||| || || |||||||| |||| |||| || || ||
Sbjct 1815621 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 1815562
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942
||| |||||||| || || || |||||||| | ||||| | || || || | ||
Sbjct 1815561 CATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGTGGTAAGAAGAG 1815502
Query 24943 AACGAAAGACGTCGACA 24959
|| |||| | ||| |||
Sbjct 1815501 AAAGAAAAAAGTCTACA 1815485
>seq5
Length=1517892
Score = 120 bits (132), Expect = 3e-22
Identities = 605/950 (64%), Gaps = 43/950 (5%)
Strand=Plus/Minus
Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139
||| || || | ||| || || || || ||||| || ||| |||||||| ||
Sbjct 776050 AATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCACA 775991
Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG--CTTTTTCGGTTACAA 139197
|||||| || | ||||||| |||| || || | |||||| |||||| |||||||
Sbjct 775990 ACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTT--GTTACAA 775933
Query 139198 GCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTT 139256
|||||||| |||||||| | ||||| |||||||| |||| ||| | || | ||
Sbjct 775932 GCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCAT-- 775875
Query 139257 GAACAAGTCCCT---AGCTT-----GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTAC 139308
|| || | | ||| | || ||| | | | | ||| | | ||||||
Sbjct 775874 --ACCAGAGCTTTTGAGCCTTCACAGTCTTT--CTTCCTTTACCTTCTT---GTTCGTAC 775822
Query 139309 TTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGA-AAGA---TCGCGACACTT 139364
||| || | | | || ||| ||||| || || |||| ||| | || || ||
Sbjct 775821 TTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTT 775762
Query 139365 GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGG 139424
| || | | | | |||| | |||||| | || ||| ||||||||||||| ||
Sbjct 775761 G----GAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGG 775706
Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTT 139484
||||||||| || | |||||| || || | | |||||| ||| ||| | |
Sbjct 775705 AATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCT 775646
Query 139485 CATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC 139544
|| | | ||||||||| | || ||||||||||| |||| || | ||| | ||| ||
Sbjct 775645 GATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACC 775586
Query 139545 ---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACAT 139601
| || || |||||||| ||||||| || | ||| ||||| || || || | |||
Sbjct 775585 TGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCAT 775526
Query 139602 CGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCTC 139657
|| || ||| | | || |||||||| | | |||| ||| |||| | ||
Sbjct 775525 AGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGT----ACTTC 775470
Query 139658 GGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGC 139717
|| | || | | | ||||| || || | || || || || | | || ||
Sbjct 775469 TGATATTGTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCAC-ATTGC 775411
Query 139718 GT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGAC 139776
| || || ||||| |||||| ||| ||| |||| ||| | || || || || ||
Sbjct 775410 TTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAG 775351
Query 139777 GAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATT 139836
|| | || || | || || || |||| ||| ||| ||||| |||||
Sbjct 775350 GACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAA 775291
Query 139837 TGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCG 139896
||| ||||||| | ||| ||||| || || | ||||| || ||||||||||||
Sbjct 775290 CGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCG 775231
Query 139897 ACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttC 139956
| | || ||||||| || || || || ||||| || ||| | | | | |
Sbjct 775230 ATGGCCACACGCATCACCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGC 775171
Query 139957 AGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| || |||| | |||||| | |||||||| | |||||||| ||
Sbjct 775170 AAGTAGGATCTCTCCAATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTC 775121
>seq1
Length=2451740
Score = 116 bits (128), Expect = 3e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776
|||| || | |||||||| || ||||| | || || || || | ||||| | || |
Sbjct 160485 TTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATTGACA 160544
Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836
|| || |||||||||||||| || || || || || || |||||| | |||||||
Sbjct 160545 ATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTGATCT 160604
Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896
|||| || || || |||||||| |||| | |||| || || ||||| |||||||| |
Sbjct 160605 TTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAGGAGT 160664
Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| || || |||||||| | ||||| | || ||
Sbjct 160665 CCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 160698
>seq4
Length=1931745
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || ||| | ||||| || || || |||
Sbjct 933878 AAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAA 933819
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||||||| |||| | |||| || || |||||||||||||| || || || |||
Sbjct 933818 CAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCAC 933759
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| | ||||| | || ||
Sbjct 933758 TTGGTTCTTAGATTGAGAGGTGG 933736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897560633960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |