Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq5 120 3e-22 seq1 116 3e-21 seq4 96.9 3e-15 >seq3 Length=2123196 Score = 131 bits (144), Expect = 2e-25 Identities = 183/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | ||||| || || ||||| || ||||| | || || || || | Sbjct 1815741 GATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCCTC 1815682 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 1815681 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCA 1815622 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | |||||||||||||| || || |||||||| |||| |||| || || || Sbjct 1815621 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 1815562 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 ||| |||||||| || || || |||||||| | ||||| | || || || | || Sbjct 1815561 CATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGTGGTAAGAAGAG 1815502 Query 24943 AACGAAAGACGTCGACA 24959 || |||| | ||| ||| Sbjct 1815501 AAAGAAAAAAGTCTACA 1815485 >seq5 Length=1517892 Score = 120 bits (132), Expect = 3e-22 Identities = 605/950 (64%), Gaps = 43/950 (5%) Strand=Plus/Minus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 ||| || || | ||| || || || || ||||| || ||| |||||||| || Sbjct 776050 AATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCACA 775991 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG--CTTTTTCGGTTACAA 139197 |||||| || | ||||||| |||| || || | |||||| |||||| ||||||| Sbjct 775990 ACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTT--GTTACAA 775933 Query 139198 GCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTT 139256 |||||||| |||||||| | ||||| |||||||| |||| ||| | || | || Sbjct 775932 GCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCAT-- 775875 Query 139257 GAACAAGTCCCT---AGCTT-----GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTAC 139308 || || | | ||| | || ||| | | | | ||| | | |||||| Sbjct 775874 --ACCAGAGCTTTTGAGCCTTCACAGTCTTT--CTTCCTTTACCTTCTT---GTTCGTAC 775822 Query 139309 TTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGA-AAGA---TCGCGACACTT 139364 ||| || | | | || ||| ||||| || || |||| ||| | || || || Sbjct 775821 TTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTT 775762 Query 139365 GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGG 139424 | || | | | | |||| | |||||| | || ||| ||||||||||||| || Sbjct 775761 G----GAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGG 775706 Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTT 139484 ||||||||| || | |||||| || || | | |||||| ||| ||| | | Sbjct 775705 AATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCT 775646 Query 139485 CATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC 139544 || | | ||||||||| | || ||||||||||| |||| || | ||| | ||| || Sbjct 775645 GATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACC 775586 Query 139545 ---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACAT 139601 | || || |||||||| ||||||| || | ||| ||||| || || || | ||| Sbjct 775585 TGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCAT 775526 Query 139602 CGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCTC 139657 || || ||| | | || |||||||| | | |||| ||| |||| | || Sbjct 775525 AGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGT----ACTTC 775470 Query 139658 GGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGC 139717 || | || | | | ||||| || || | || || || || | | || || Sbjct 775469 TGATATTGTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCAC-ATTGC 775411 Query 139718 GT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGAC 139776 | || || ||||| |||||| ||| ||| |||| ||| | || || || || || Sbjct 775410 TTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAG 775351 Query 139777 GAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATT 139836 || | || || | || || || |||| ||| ||| ||||| ||||| Sbjct 775350 GACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAA 775291 Query 139837 TGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCG 139896 ||| ||||||| | ||| ||||| || || | ||||| || |||||||||||| Sbjct 775290 CGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCG 775231 Query 139897 ACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttC 139956 | | || ||||||| || || || || ||||| || ||| | | | | | Sbjct 775230 ATGGCCACACGCATCACCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGC 775171 Query 139957 AGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 | || |||| | |||||| | |||||||| | |||||||| || Sbjct 775170 AAGTAGGATCTCTCCAATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTC 775121 >seq1 Length=2451740 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || | |||||||| || ||||| | || || || || | ||||| | || | Sbjct 160485 TTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATTGACA 160544 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||||||||| || || || || || || |||||| | ||||||| Sbjct 160545 ATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTGATCT 160604 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || || || |||||||| |||| | |||| || || ||||| |||||||| | Sbjct 160605 TTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAGGAGT 160664 Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || || |||||||| | ||||| | || || Sbjct 160665 CCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 160698 >seq4 Length=1931745 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || ||| | ||||| || || || ||| Sbjct 933878 AAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAA 933819 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||||||| |||| | |||| || || |||||||||||||| || || || ||| Sbjct 933818 CAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCAC 933759 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| | ||||| | || || Sbjct 933758 TTGGTTCTTAGATTGAGAGGTGG 933736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897560633960