Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 seq4 87.8 1e-12 >seq3 Length=2123196 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| |||||||| | ||||| || ||||||||| | || ||| | Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || | | | | || || ||||| || ||||| || | || || Sbjct 1815683 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGAC 1815624 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| ||||| || ||||||| | | ||| || | |||||| Sbjct 1815623 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 1815564 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| ||||||||||| || | ||| |||| | |||||| |||| || Sbjct 1815563 AACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 1815514 >seq4 Length=1931745 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || ||||| ||| | |||| || |||||||| ||||||| | || ||| || | ||| Sbjct 933848 GACCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAGGATGGCAGAACCTTGTCTGAC 933789 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||||||||| || | ||| |||| | |||||| |||| || Sbjct 933788 TACAACATTCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGG 933736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876765970823