Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 120 7e-22 seq4 109 1e-18 seq6 91.5 3e-13 >seq5 Length=1517892 Score = 120 bits (132), Expect = 7e-22 Identities = 417/645 (65%), Gaps = 7/645 (1%) Strand=Plus/Plus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 ||||| || || | | || || || || || || |||||||| || || | ||| || Sbjct 775352 TCTTGTTTCCTCGTTGCTATGAAGGAAGACTCCATCGAAGGTATCTACGACAC-CTTGAA 775410 Query 110580 GAAAC-TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG 110638 | || ||| | || ||||| | | |||| || || ||| | ||| |||| |||| | Sbjct 775411 GCAATGTGCCTTGATCTCTAAGACCGCTGGTGGTATCGGTTTGCACATTCACAATATCAG 775470 Query 110639 CTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTT 110698 | ||| | | ||||| | || ||| | || | ||| | |||| ||| | Sbjct 775471 AAGTACAGGGTCCTACATCGCTGGTACCAACGGTACCTCTAATGGTTTGATTCCTATGGT 775530 Query 110699 AAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTC 110755 | ||||| || ||||||||| ||| || | ||||||||| |||||| || | Sbjct 775531 CCGTGTCTTTAATAACACTGCAAGATACGTCGACCAAGGTGGTAACAAGAGACCAGGTGC 775590 Query 110756 ATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAA 110815 |||||| | || | || || ||||| | ||||| ||||| ||| | || | | || Sbjct 775591 ATTTGCCTTGTACTTGGAGCCATGGCACGCGGATATCTTTGATTTCATCGATATCAGAAA 775650 Query 110816 AAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875 || || || ||||| ||||| |||||||| || || |||||||| |||| Sbjct 775651 GAACCACGGTAAGGAAGAGATCAGAGCTCGTGATTTGTTCCCAGCCTTGTGGATTCCAGA 775710 Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935 | | |||||||| |||||| || | || || ||| || | | | ||| || | Sbjct 775711 TCTGTTCATGAAGCGTGTTGAACAGAACGGTGAATGGACTTTATTCTCTCCAAATGAGGC 775770 Query 110936 TCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAA 110995 | |||| | |||||| |||||| | || ||||||| | || ||| || ||| | Sbjct 775771 TACTGGCTTGGCTGATGCATATGGTGATGAATTTGAAGCATTGTATACAAAGTACGAACA 775830 Query 110996 AGAAGGCAAGTTTCGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAAT 111054 |||||| || | ||| | | | |||||| | || |||| ||| | || Sbjct 775831 AGAAGGTAAAGGAAG-AAAGACTGTGAAGGCTCAAAAGCTCTGGTATGCGATCTTGGAGG 775889 Query 111055 CACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTA 111114 |||| ||||||||| || || | || | ||||||||| | ||| || || | Sbjct 775890 CACAGACTGAAACTGGTACACCATTCATGCTTTATAAAGATGCTTGTAACAAAAAGTCCA 775949 Query 111115 ATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 |||| | ||| || || | || |||||| || ||||| |||| Sbjct 775950 ATCAGAAGAACTTGGGTATCATCAAGTCTTCGAACTTGTGTTGTG 775994 >seq4 Length=1931745 Score = 109 bits (120), Expect = 1e-18 Identities = 165/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733 |||| | |||| | ||||||||||| ||||| || ||| | || || | |||||| ||| Sbjct 969181 CTTCCAATGGAATAGTTCCAATGTTGAGAGTGTTTAACAATACAGCCAGGTATGTGGATC 969240 Query 110734 AAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790 ||||||| |||||| || | ||||| || || | ||||| |||||| | ||| Sbjct 969241 AAGGTGGGAATAAGAGGCCAGGGGCCTTTGCAATATACTTGGAACCATGGCATGCTGATG 969300 Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850 | ||||| ||| | || ||||| || || || || || |||| ||||| | ||| Sbjct 969301 TCTTTGAGTTCCTGGATCTTCGGAAGAACCATGGGAAGGAGGAACTGCGAGCAAGAGATC 969360 Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATG 110904 | || ||||| ||||||| | ||| | || ||| || || ||||| |||| Sbjct 969361 TGTTCTATGCCTTGTGGATACCTGATCTGTTTATGGAAAAAGTGCAAGATAATG 969414 >seq6 Length=1261692 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCT 131854 || || ||||| || || |||||| | | ||||||| |||||| ||| ||| | Sbjct 58293 ATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGATGACGCCCTATTTGCA 58352 Query 131855 ACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCT 131914 ||||| || ||||||||| |||||||||||| ||||| || ||| | ||| | Sbjct 58353 GAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCTTCTTCTCCGGTTCATTCGCCTCC 58412 Query 131915 ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGG 131949 ||||||||| | |||||| | || |||||||| || Sbjct 58413 ATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGG 58447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812693557727