Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 120 7e-22
seq4 109 1e-18
seq6 91.5 3e-13
>seq5
Length=1517892
Score = 120 bits (132), Expect = 7e-22
Identities = 417/645 (65%), Gaps = 7/645 (1%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
||||| || || | | || || || || || || |||||||| || || | ||| ||
Sbjct 775352 TCTTGTTTCCTCGTTGCTATGAAGGAAGACTCCATCGAAGGTATCTACGACAC-CTTGAA 775410
Query 110580 GAAAC-TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG 110638
| || ||| | || ||||| | | |||| || || ||| | ||| |||| |||| |
Sbjct 775411 GCAATGTGCCTTGATCTCTAAGACCGCTGGTGGTATCGGTTTGCACATTCACAATATCAG 775470
Query 110639 CTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTT 110698
| ||| | | ||||| | || ||| | || | ||| | |||| ||| |
Sbjct 775471 AAGTACAGGGTCCTACATCGCTGGTACCAACGGTACCTCTAATGGTTTGATTCCTATGGT 775530
Query 110699 AAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTC 110755
| ||||| || ||||||||| ||| || | ||||||||| |||||| || |
Sbjct 775531 CCGTGTCTTTAATAACACTGCAAGATACGTCGACCAAGGTGGTAACAAGAGACCAGGTGC 775590
Query 110756 ATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAA 110815
|||||| | || | || || ||||| | ||||| ||||| ||| | || | | ||
Sbjct 775591 ATTTGCCTTGTACTTGGAGCCATGGCACGCGGATATCTTTGATTTCATCGATATCAGAAA 775650
Query 110816 AAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875
|| || || ||||| ||||| |||||||| || || |||||||| ||||
Sbjct 775651 GAACCACGGTAAGGAAGAGATCAGAGCTCGTGATTTGTTCCCAGCCTTGTGGATTCCAGA 775710
Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935
| | |||||||| |||||| || | || || ||| || | | | ||| || |
Sbjct 775711 TCTGTTCATGAAGCGTGTTGAACAGAACGGTGAATGGACTTTATTCTCTCCAAATGAGGC 775770
Query 110936 TCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAA 110995
| |||| | |||||| |||||| | || ||||||| | || ||| || ||| |
Sbjct 775771 TACTGGCTTGGCTGATGCATATGGTGATGAATTTGAAGCATTGTATACAAAGTACGAACA 775830
Query 110996 AGAAGGCAAGTTTCGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAAT 111054
|||||| || | ||| | | | |||||| | || |||| ||| | ||
Sbjct 775831 AGAAGGTAAAGGAAG-AAAGACTGTGAAGGCTCAAAAGCTCTGGTATGCGATCTTGGAGG 775889
Query 111055 CACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTA 111114
|||| ||||||||| || || | || | ||||||||| | ||| || || |
Sbjct 775890 CACAGACTGAAACTGGTACACCATTCATGCTTTATAAAGATGCTTGTAACAAAAAGTCCA 775949
Query 111115 ATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|||| | ||| || || | || |||||| || ||||| ||||
Sbjct 775950 ATCAGAAGAACTTGGGTATCATCAAGTCTTCGAACTTGTGTTGTG 775994
>seq4
Length=1931745
Score = 109 bits (120), Expect = 1e-18
Identities = 165/234 (71%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733
|||| | |||| | ||||||||||| ||||| || ||| | || || | |||||| |||
Sbjct 969181 CTTCCAATGGAATAGTTCCAATGTTGAGAGTGTTTAACAATACAGCCAGGTATGTGGATC 969240
Query 110734 AAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790
||||||| |||||| || | ||||| || || | ||||| |||||| | |||
Sbjct 969241 AAGGTGGGAATAAGAGGCCAGGGGCCTTTGCAATATACTTGGAACCATGGCATGCTGATG 969300
Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850
| ||||| ||| | || ||||| || || || || || |||| ||||| | |||
Sbjct 969301 TCTTTGAGTTCCTGGATCTTCGGAAGAACCATGGGAAGGAGGAACTGCGAGCAAGAGATC 969360
Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATG 110904
| || ||||| ||||||| | ||| | || ||| || || ||||| ||||
Sbjct 969361 TGTTCTATGCCTTGTGGATACCTGATCTGTTTATGGAAAAAGTGCAAGATAATG 969414
>seq6
Length=1261692
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCT 131854
|| || ||||| || || |||||| | | ||||||| |||||| ||| ||| |
Sbjct 58293 ATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGATGACGCCCTATTTGCA 58352
Query 131855 ACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCT 131914
||||| || ||||||||| |||||||||||| ||||| || ||| | ||| |
Sbjct 58353 GAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCTTCTTCTCCGGTTCATTCGCCTCC 58412
Query 131915 ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGG 131949
||||||||| | |||||| | || |||||||| ||
Sbjct 58413 ATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGG 58447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812693557727
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |