Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 284 2e-71
seq6 154 2e-32
seq4 116 5e-21
>seq5
Length=1517892
Score = 284 bits (314), Expect = 2e-71
Identities = 1337/2093 (64%), Gaps = 79/2093 (4%)
Strand=Plus/Minus
Query 68367 ATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGT 68426
||| | ||| || ||||| | | ||||||| || ||| | | ||||||||||||||
Sbjct 776977 ATCGACTGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGT 776918
Query 68427 TTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATC 68486
|||| || |||| |||||||| ||||| || ||||| ||||
Sbjct 776917 CTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGG--- 776861
Query 68487 GGCT---ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543
|||| |||||||| |||| |||||| ||| |||||| |||| | | ||| || ||
Sbjct 776860 GGCTCTGATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGC 776801
Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603
||| | || || ||||||||| |||||||| | ||||| | | | || | |
Sbjct 776800 CATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTG 776741
Query 68604 ATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGAT 68660
| ||||| | | | ||||| ||||| || |||||||| || ||||| ||
Sbjct 776740 CTTTGGAATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCAT 776681
Query 68661 CTCATCATTCCACAATTTTCTC---TCCGTTAAAACTCTAAGGAGATGCGGATTAACTAT 68717
| |||| ||| | | | | || ||| | | || | | || || || ||
Sbjct 776680 TGCGTCATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAAT 776624
Query 68718 TTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 68777
|| ||||| || | | || | ||||| ||| |||||| || ||||| || | | |
Sbjct 776623 CTGGAATTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACA 776564
Query 68778 TTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACT 68837
||| || | |||| ||||||| || || ||||||||||| ||||| ||||| | |
Sbjct 776563 TTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGA 776504
Query 68838 ATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCC-AATCCCAAAGATCAG 68896
||||| | ||||| | || | | |||| | ||| ||| ||||||| | ||||
Sbjct 776503 GTTTCTCATACCATACTTGGAAATGTCAGCTTTCA-ATGAGTCCCAATCCCACAAGTCAG 776445
Query 68897 ATGG--TACAACATTCCAAAGATCGTATTGTAGAATT--CCGTTACTTGCATATGATCCA 68952
||| ||| || ||| || || |||| | ||| || | | || || ||
Sbjct 776444 TTGGCTTACGACC--CCAGAGGTCAAATTGCA--ATTGGCCCTGAGAAGCTGGAGAGCCT 776389
Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012
| | ||| || | ||||| || ||| | ||| | ||||| | ||||||
Sbjct 776388 GGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAACTCAACAGAGGCCTCGACAGCACCG 776329
Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT--AGACTATCGAATG 69070
| || || ||||| || || | | || | |||| || | ||||| | || |
Sbjct 776328 TGGTAGATAGTTTCAAAGATTTGGATGTTCAACTCTTTAGCAGCATCAGACT--CAAAAG 776271
Query 69071 GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130
| | |||| | || || ||||| || | || || || |||| | || ||||| |
Sbjct 776270 GCATACGTAACATCATGAAGGCATCCGCAAGGCCTTGGACACCAAGGGCAATTGGTCTGT 776211
Query 69131 GTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190
|||| | || ||| ||||||||||| || || ||||| | || || ||| | |
Sbjct 776210 TTCTCATGTTAGAAGCACGAGCTTCTGGAACTGGGTAGTAATTTCTGTCGATGATTCTGT 776151
Query 69191 T-AAGAT-TTCGGACTACTACTTTAACCACGTC------CTTT-----------AGTTTG 69231
| ||| | || | | | || || | | || |||| ||||||
Sbjct 776150 TCAAGTTCTTTGTA--AGCACCTTGGCAATATCGTGCAACTTTTGGAAGTTATAAGTTTG 776093
Query 69232 AGA-AAATCA--AATCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTA 69288
|| ||| || || || | ||| | ||| | || || | ||||| | |||
Sbjct 776092 AGTCAAACCATCAACCGACT-TCTCAATGAAAGCTGGA-AGGGCAATGGATGCCAAGTTA 776035
Query 69289 CAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACAT 69348
||||| || ||||| | | | | || | | ||||| ||| | || | |
Sbjct 776034 CAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCACAACACAAGTTCGAAGAC 775975
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
||||| | |||| || | |||||| |||||||||||| || || || ||||| ||
Sbjct 775974 TTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTTTATAAAGCATG 775915
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT---AGCA 69465
|| || |||||||||||| |||| | || | || | | ||| || | | |||
Sbjct 775914 AATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCA---GAGCTTTTGAGCC 775858
Query 69466 TTTATTACGGTCTTGTAACGCTTC---TCTTTTTCATATTGTGTATATAGCCGTTCGAAT 69522
|| | | ||||| | || |||| ||| || | |||||| | ||| |||
Sbjct 775857 TTCA---CAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGCTTCAAAT 775801
Query 69523 TCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACA 69582
||||| || | ||||| |||| |||| | ||||||||| | | || | ||| ||
Sbjct 775800 TCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCCATTCA 775741
Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCT 69642
| | | | ||| || ||||| || ||||| |||||||| | ||| || | |||
Sbjct 775740 CCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACAAATCA 775681
Query 69643 CTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCA 69702
| | ||| | ||||| || || || ||| | | ||||| || || | |||||
Sbjct 775680 CGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAGATATCC 775621
Query 69703 GAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCT 69762
| |||||||| || | || | || | | || |||| || || || || || ||
Sbjct 775620 GCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCG 775561
Query 69763 ATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCA 69822
| |||||| |||||||||||| |||| | | ||| ||||| | ||||||||| ||||
Sbjct 775560 ACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACCATTAGAGGTACCG 775501
Query 69823 TTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCT 69882
|| || |||| || || ||| | | ||||| ||| | ||| || ||
Sbjct 775500 TTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGTGCAAACCGATACCA 775441
Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942
|| || | |||||||| | ||||| | ||||| ||||| || ||||| || |||
Sbjct 775440 CCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAG 775381
Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002
|| || |||| || || ||||| ||||| || | | ||| || |||||
Sbjct 775380 TCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTACCAGCATTG 775321
Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA 70062
|| || || ||||| ||||| ||||| | |||||| | ||| ||||| ||||||||
Sbjct 775320 AACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAAGTTTCAATC 775261
Query 70063 GCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGG 70121
| || | ||||| | || | || || || || || |||||||||| || ||||| ||
Sbjct 775260 ACGGACTTCATATCTCTACCG-TGGATACCGATGGCCACACGCATCACCAAGTGCTGTGG 775202
Query 70122 TCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCC 70181
|| || | ||| || | | | | || ||| ||| | |||| || || || ||
Sbjct 775201 ACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAATGTCTTGAAACC 775142
Query 70182 AAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT--A 70239
||| |||||||| |||||||| ||||| | ||| |||| || | | |||||| |
Sbjct 775141 AAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAACTCATCCTTGAA 775082
Query 70240 TATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCAT--TT 70296
|||| || |||| ||||| | | || | || || | ||| | | |
Sbjct 775081 CTCTTGG--ACAATAT-CATAAGTCTCCTTAGACACCATTGGCG--CGTGCAAATTGGTC 775027
Query 70297 TTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCC 70356
|| || || | ||||||| | || ||||| || ||| | || ||| | || | |||| |
Sbjct 775026 TTTGGGTTGATATAGTTGTACAACTCTTCAATCACAACGCTGAATTGCTTCGTGGTTTGC 774967
Query 70357 TTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
||||| || || || ||||| |||||||| || || |||||||||| || ||
Sbjct 774966 TTGTGCAAGTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGTCCGGGTG 774914
>seq6
Length=1261692
Score = 154 bits (170), Expect = 2e-32
Identities = 373/558 (67%), Gaps = 10/558 (2%)
Strand=Plus/Minus
Query 39607 AAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGA 39666
||||| || || ||||| || |||| || || || | | ||| || ||||||||
Sbjct 58517 AAACAACAAACAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGA 58458
Query 39667 AAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCC 39726
|| || | || ||||| | ||| | ||| || | |||||| |||| || || || ||
Sbjct 58457 GAAGGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACC 58398
Query 39727 AGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC 39786
|| |||||||| ||||| || || ||||| ||||| ||||||||| | | | ||
Sbjct 58397 GGAGAAGAAGATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTC 58338
Query 39787 ATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843
|| || ||||| || ||||||||||| |||||||| | ||| || || |||||
Sbjct 58337 ATCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTC 58278
Query 39844 TATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903
|| || || || | | | || | || || | || || || || ||||
Sbjct 58277 AATGGCGTTGAACAAGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAA 58218
Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963
|| | || || |||||||| || ||| ||||| || || || || || | ||
Sbjct 58217 GGAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGC 58158
Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023
|| | ||||| ||||||| | | || |||| |||| || || || || || || ||
Sbjct 58157 CTCTGGGATTTGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTC 58098
Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTA-AT-AAAATATTTTTCATCGGGTGTCAAT 40081
| |||||||||||| |||| || | || | || || | | | || || |||||
Sbjct 58097 AGAAGCGGCAAAAAAGGCCAGCAC-TCTTGAGATGAAGAAACGCTCGTTCTCGT-TCAAT 58040
Query 40082 ---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138
|| |||||||| | | ||| ||||||| ||| | || || || ||||| || ||
Sbjct 58039 CTGTTGTTCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAA 57980
Query 40139 GCCTCTGCCTTTTTGTAC 40156
||||| ||||| || |||
Sbjct 57979 GCCTCAGCCTTCTTATAC 57962
>seq4
Length=1931745
Score = 116 bits (128), Expect = 5e-21
Identities = 182/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATC 69641
|||| ||| | ||| || |||||| ||||| || ||||| | || ||| || |||||
Sbjct 969415 TCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGC-ATAGAACAGATC 969357
Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701
||| | || ||| || || || || || |||||| || ||||| | | |||
Sbjct 969356 TCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACATC 969297
Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761
|| |||||||||||| | ||||| || | | | || || | ||||| || || |||||
Sbjct 969296 AGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGATC 969237
Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821
| || ||||| || || ||| | ||||||| ||| |||| || ||||| || | ||
Sbjct 969236 CACATACCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTCCATTGGAAGTGCC 969177
Query 69822 ATTTGTTCCAGAAATATA 69839
|||||| |||| |||||
Sbjct 969176 ATTTGTACCAGCGATATA 969159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908739895480
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