Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 284 2e-71 seq6 154 2e-32 seq4 116 5e-21 >seq5 Length=1517892 Score = 284 bits (314), Expect = 2e-71 Identities = 1337/2093 (64%), Gaps = 79/2093 (4%) Strand=Plus/Minus Query 68367 ATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGT 68426 ||| | ||| || ||||| | | ||||||| || ||| | | |||||||||||||| Sbjct 776977 ATCGACTGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGT 776918 Query 68427 TTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATC 68486 |||| || |||| |||||||| ||||| || ||||| |||| Sbjct 776917 CTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGG--- 776861 Query 68487 GGCT---ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 |||| |||||||| |||| |||||| ||| |||||| |||| | | ||| || || Sbjct 776860 GGCTCTGATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGC 776801 Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603 ||| | || || ||||||||| |||||||| | ||||| | | | || | | Sbjct 776800 CATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTG 776741 Query 68604 ATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGAT 68660 | ||||| | | | ||||| ||||| || |||||||| || ||||| || Sbjct 776740 CTTTGGAATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCAT 776681 Query 68661 CTCATCATTCCACAATTTTCTC---TCCGTTAAAACTCTAAGGAGATGCGGATTAACTAT 68717 | |||| ||| | | | | || ||| | | || | | || || || || Sbjct 776680 TGCGTCATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAAT 776624 Query 68718 TTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 68777 || ||||| || | | || | ||||| ||| |||||| || ||||| || | | | Sbjct 776623 CTGGAATTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACA 776564 Query 68778 TTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACT 68837 ||| || | |||| ||||||| || || ||||||||||| ||||| ||||| | | Sbjct 776563 TTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGA 776504 Query 68838 ATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCC-AATCCCAAAGATCAG 68896 ||||| | ||||| | || | | |||| | ||| ||| ||||||| | |||| Sbjct 776503 GTTTCTCATACCATACTTGGAAATGTCAGCTTTCA-ATGAGTCCCAATCCCACAAGTCAG 776445 Query 68897 ATGG--TACAACATTCCAAAGATCGTATTGTAGAATT--CCGTTACTTGCATATGATCCA 68952 ||| ||| || ||| || || |||| | ||| || | | || || || Sbjct 776444 TTGGCTTACGACC--CCAGAGGTCAAATTGCA--ATTGGCCCTGAGAAGCTGGAGAGCCT 776389 Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012 | | ||| || | ||||| || ||| | ||| | ||||| | |||||| Sbjct 776388 GGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAACTCAACAGAGGCCTCGACAGCACCG 776329 Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT--AGACTATCGAATG 69070 | || || ||||| || || | | || | |||| || | ||||| | || | Sbjct 776328 TGGTAGATAGTTTCAAAGATTTGGATGTTCAACTCTTTAGCAGCATCAGACT--CAAAAG 776271 Query 69071 GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130 | | |||| | || || ||||| || | || || || |||| | || ||||| | Sbjct 776270 GCATACGTAACATCATGAAGGCATCCGCAAGGCCTTGGACACCAAGGGCAATTGGTCTGT 776211 Query 69131 GTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190 |||| | || ||| ||||||||||| || || ||||| | || || ||| | | Sbjct 776210 TTCTCATGTTAGAAGCACGAGCTTCTGGAACTGGGTAGTAATTTCTGTCGATGATTCTGT 776151 Query 69191 T-AAGAT-TTCGGACTACTACTTTAACCACGTC------CTTT-----------AGTTTG 69231 | ||| | || | | | || || | | || |||| |||||| Sbjct 776150 TCAAGTTCTTTGTA--AGCACCTTGGCAATATCGTGCAACTTTTGGAAGTTATAAGTTTG 776093 Query 69232 AGA-AAATCA--AATCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTA 69288 || ||| || || || | ||| | ||| | || || | ||||| | ||| Sbjct 776092 AGTCAAACCATCAACCGACT-TCTCAATGAAAGCTGGA-AGGGCAATGGATGCCAAGTTA 776035 Query 69289 CAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACAT 69348 ||||| || ||||| | | | | || | | ||||| ||| | || | | Sbjct 776034 CAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCACAACACAAGTTCGAAGAC 775975 Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408 ||||| | |||| || | |||||| |||||||||||| || || || ||||| || Sbjct 775974 TTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTTTATAAAGCATG 775915 Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT---AGCA 69465 || || |||||||||||| |||| | || | || | | ||| || | | ||| Sbjct 775914 AATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCA---GAGCTTTTGAGCC 775858 Query 69466 TTTATTACGGTCTTGTAACGCTTC---TCTTTTTCATATTGTGTATATAGCCGTTCGAAT 69522 || | | ||||| | || |||| ||| || | |||||| | ||| ||| Sbjct 775857 TTCA---CAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGCTTCAAAT 775801 Query 69523 TCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACA 69582 ||||| || | ||||| |||| |||| | ||||||||| | | || | ||| || Sbjct 775800 TCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCCATTCA 775741 Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCT 69642 | | | | ||| || ||||| || ||||| |||||||| | ||| || | ||| Sbjct 775740 CCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACAAATCA 775681 Query 69643 CTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCA 69702 | | ||| | ||||| || || || ||| | | ||||| || || | ||||| Sbjct 775680 CGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAGATATCC 775621 Query 69703 GAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCT 69762 | |||||||| || | || | || | | || |||| || || || || || || Sbjct 775620 GCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCG 775561 Query 69763 ATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCA 69822 | |||||| |||||||||||| |||| | | ||| ||||| | ||||||||| |||| Sbjct 775560 ACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACCATTAGAGGTACCG 775501 Query 69823 TTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCT 69882 || || |||| || || ||| | | ||||| ||| | ||| || || Sbjct 775500 TTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGTGCAAACCGATACCA 775441 Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942 || || | |||||||| | ||||| | ||||| ||||| || ||||| || ||| Sbjct 775440 CCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAG 775381 Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002 || || |||| || || ||||| ||||| || | | ||| || ||||| Sbjct 775380 TCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTACCAGCATTG 775321 Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA 70062 || || || ||||| ||||| ||||| | |||||| | ||| ||||| |||||||| Sbjct 775320 AACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAAGTTTCAATC 775261 Query 70063 GCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGG 70121 | || | ||||| | || | || || || || || |||||||||| || ||||| || Sbjct 775260 ACGGACTTCATATCTCTACCG-TGGATACCGATGGCCACACGCATCACCAAGTGCTGTGG 775202 Query 70122 TCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCC 70181 || || | ||| || | | | | || ||| ||| | |||| || || || || Sbjct 775201 ACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAATGTCTTGAAACC 775142 Query 70182 AAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT--A 70239 ||| |||||||| |||||||| ||||| | ||| |||| || | | |||||| | Sbjct 775141 AAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAACTCATCCTTGAA 775082 Query 70240 TATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCAT--TT 70296 |||| || |||| ||||| | | || | || || | ||| | | | Sbjct 775081 CTCTTGG--ACAATAT-CATAAGTCTCCTTAGACACCATTGGCG--CGTGCAAATTGGTC 775027 Query 70297 TTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCC 70356 || || || | ||||||| | || ||||| || ||| | || ||| | || | |||| | Sbjct 775026 TTTGGGTTGATATAGTTGTACAACTCTTCAATCACAACGCTGAATTGCTTCGTGGTTTGC 774967 Query 70357 TTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 ||||| || || || ||||| |||||||| || || |||||||||| || || Sbjct 774966 TTGTGCAAGTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGTCCGGGTG 774914 >seq6 Length=1261692 Score = 154 bits (170), Expect = 2e-32 Identities = 373/558 (67%), Gaps = 10/558 (2%) Strand=Plus/Minus Query 39607 AAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGA 39666 ||||| || || ||||| || |||| || || || | | ||| || |||||||| Sbjct 58517 AAACAACAAACAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGA 58458 Query 39667 AAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCC 39726 || || | || ||||| | ||| | ||| || | |||||| |||| || || || || Sbjct 58457 GAAGGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACC 58398 Query 39727 AGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC 39786 || |||||||| ||||| || || ||||| ||||| ||||||||| | | | || Sbjct 58397 GGAGAAGAAGATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTC 58338 Query 39787 ATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843 || || ||||| || ||||||||||| |||||||| | ||| || || ||||| Sbjct 58337 ATCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTC 58278 Query 39844 TATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 || || || || | | | || | || || | || || || || |||| Sbjct 58277 AATGGCGTTGAACAAGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAA 58218 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 || | || || |||||||| || ||| ||||| || || || || || | || Sbjct 58217 GGAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGC 58158 Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023 || | ||||| ||||||| | | || |||| |||| || || || || || || || Sbjct 58157 CTCTGGGATTTGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTC 58098 Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTA-AT-AAAATATTTTTCATCGGGTGTCAAT 40081 | |||||||||||| |||| || | || | || || | | | || || ||||| Sbjct 58097 AGAAGCGGCAAAAAAGGCCAGCAC-TCTTGAGATGAAGAAACGCTCGTTCTCGT-TCAAT 58040 Query 40082 ---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 || |||||||| | | ||| ||||||| ||| | || || || ||||| || || Sbjct 58039 CTGTTGTTCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAA 57980 Query 40139 GCCTCTGCCTTTTTGTAC 40156 ||||| ||||| || ||| Sbjct 57979 GCCTCAGCCTTCTTATAC 57962 >seq4 Length=1931745 Score = 116 bits (128), Expect = 5e-21 Identities = 182/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATC 69641 |||| ||| | ||| || |||||| ||||| || ||||| | || ||| || ||||| Sbjct 969415 TCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGC-ATAGAACAGATC 969357 Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 ||| | || ||| || || || || || |||||| || ||||| | | ||| Sbjct 969356 TCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACATC 969297 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 || |||||||||||| | ||||| || | | | || || | ||||| || || ||||| Sbjct 969296 AGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGATC 969237 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | || ||||| || || ||| | ||||||| ||| |||| || ||||| || | || Sbjct 969236 CACATACCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTCCATTGGAAGTGCC 969177 Query 69822 ATTTGTTCCAGAAATATA 69839 |||||| |||| ||||| Sbjct 969176 ATTTGTACCAGCGATATA 969159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908739895480