Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 343 2e-89 seq4 116 5e-21 seq6 111 2e-19 >seq5 Length=1517892 Score = 343 bits (380), Expect = 2e-89 Identities = 936/1410 (66%), Gaps = 51/1410 (4%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 |||||| || | |||||||| ||||| ||||| || | |||||||||||| | || || Sbjct 776593 GTAGATATTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGA 776534 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATG----C 110822 ||| |||||||||||||| | ||||||| ||| | | ||| | || ||| | Sbjct 776533 GGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGC 776474 Query 110823 GTTCCTTGAGAAC--ATCCCAGTCGT-AGTTGAGCTTGGTTTCACCTTCCCACATGTCAA 110879 ||| |||| | |||||| || ||||| |||| || |||| | ||||| Sbjct 776473 TTTCAATGAGTCCCAATCCCACAAGTCAGTTG-GCTT------ACGACCCCAGAGGTCAA 776421 Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939 | || | || || || || ||||| || |||| ||| |||| ||||| |||| Sbjct 776420 ATTGCAATTGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTT 776361 Query 110940 CAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 |||||| ||| ||| ||||| | | |||| || || ||||||||||| | Sbjct 776360 GAGCCAACTCAACAGAG-GCCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATG 776302 Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGC 111057 |||| ||| || || |||| || ||||| | | || || ||| || || ||||||| Sbjct 776301 TTCAACTCTTTAGCAGCATCAGACTCAAAAGGCATA-CGTAACATCATGAAGGCATCCGC 776243 Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117 || ||||| ||||| | |||| ||||||| || ||| ||||| || || ||| Sbjct 776242 AAGGCCTTGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCT-TCTG 776184 Query 111118 -AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 ||| || || |||||||||| |||| || ||| | || || |||| | ||| | | Sbjct 776183 GAACTGGGTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAA 776124 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT-------- 111228 | || || | |||| | | | |||| ||||| ||| || |||| Sbjct 776123 TATCGTGCAACTTTTGGAAGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGA 776064 Query 111229 ----TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284 ||||||||| || |||||||| || |||||||| ||| || | | ||||| Sbjct 776063 AAGCTGGAAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACT 776004 Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344 | | ||| || ||| ||||| ||| ||| || | ||||| ||||| || || || Sbjct 776003 CGACAATCTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACT 775944 Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404 | ||||| || ||||| || || |||||| | || || || || || ||||||| | | Sbjct 775943 TTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCA 775884 Query 111405 GAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT--CCCTCCGCCT 111461 || || | ||| | | | | | || ||| | | || || | || || | Sbjct 775883 AGATCGCATACCAGAGCTTTTGAGCCTTC-ACAGT--CTTTCTTCCTTTACCTTCTTGTT 775827 Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521 |||||||||| || | |||||||| || ||||| || || | | || | |||| Sbjct 775826 CGTACTTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCT 775767 Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTG 111581 | |||| |||| | || ||||| ||| | ||||| ||||||||||| || |||| Sbjct 775766 CATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTG 775707 Query 111582 GAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGT 111640 ||||||||| || || || | ||| | | | | || | ||||| | ||| ||||| | Sbjct 775706 GAATCCACAAGGCTGGGAACAAATCACGAGCTCTGATC-TCTTCCTTACCGTGGTTCTTT 775648 Query 111641 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 111700 | | || | ||| || | ||||||||||||||||||||| | || | || | | Sbjct 775647 CTGATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCA 775588 Query 111701 CC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 111756 || || | | || | |||| | || || | || ||| ||||| || || | Sbjct 775587 CCTGGTCTCTTGTTACC-ACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGAC 775529 Query 111757 CATTGGAATAATACCATCTGATTGACCATTTGTCCCC-CGAA-TACGAGATT-TATTGGC 111813 ||| ||||| | ||||| || ||| || || || ||| || || | || | Sbjct 775528 CATAGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACT--- 775472 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 ||| | || || ||||||| || ||||| ||||| ||| ||||| ||||| | Sbjct 775471 TCTGATATTGTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTG 775412 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | | || | |||||||| | ||| ||||| ||||| | || | ||||| ||| Sbjct 775411 CTTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGA 775352 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993 ||||||||| || ||||| |||||||||||||| | ||||| | ||||| |||| Sbjct 775351 GGACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTA 775292 Query 111994 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 || || |||||| || ||| || || | || || | || ||| |||||||| || Sbjct 775291 ACGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACC 775232 Query 112054 GATTGCGACCCGCATGAACATGTACTGTGG 112083 ||| || || ||||| | || || |||||| Sbjct 775231 GATGGCCACACGCATCACCAAGTGCTGTGG 775202 >seq4 Length=1931745 Score = 116 bits (128), Expect = 5e-21 Identities = 131/173 (76%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 164662 || ||||||||||||||||| || || ||||| |||||||||||||| |||| ||||| Sbjct 1420697 TACGGTCGTGTTGCACCACGCTCTGGACTCGCGGTGAAGCATGGTATCTCAA-CAGGTGC 1420639 Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722 |||||| ||||| | || || | ||| || |||||||| || | ||||| ||| || Sbjct 1420638 CGGTGTTGTTGATGCTGATTACAGAGGCGAGGTCAAAGTGGTGTTGTTCAACCACTCTGA 1420579 Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGC 164775 || ||||| ||| | || ||||| || | || || ||| | || || |||| Sbjct 1420578 GAAGGACTTCGAGATCAACAAAGGTGACAGAATAGCCCAATTGGTTCTGGAGC 1420526 Score = 113 bits (124), Expect = 6e-20 Identities = 292/441 (66%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 ||| ||| || ||||||||||||||| ||||||||||| | ||||||| |||| | ||| Sbjct 970615 GCCATTGTTCTGAGATAGTACATCCCTGTCTTGAGTCCCTTTTTCCATCCGTAGAAGTGC 970556 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGG 110473 || || | ||||| | || |||||| |||| | | |||||| ||| |||| Sbjct 970555 ATGGAGGTTAGCTTCCCAACAGTGGGACTTCTCATGTAAATGTTCATGGATTGGGATTGG 970496 Query 110474 TCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCC 110530 || ||||| || | || | |||| | ||||| | | | || | || ||| Sbjct 970495 TCGATGAAAGGCGCACGGTCGACCGCGAGGTCAATTA---CTGTGCGCTGAGGGATCTCC 970439 Query 110531 CAAACTGTGCGATAGAGATTCTTGATATCATCTGGGAT-ATCTGAGATATTCTGGATGGA 110589 || || || || || | || | | | ||| || || | | || ||||||||||| Sbjct 970438 CATACGGTCTTGTACAGCTCTTTCAAAGTCTGTGGAATGATGTCA-ATGTTCTGGATGGA 970380 Query 110590 ACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAG 110649 ||| | | | || || ||| ||||||||||| | ||| | |||| || | || Sbjct 970379 ACCTTCGTCGTCGACAATTCGATTCTTCATATCCTGGTCCCATAACCCAAGCTCGATAAG 970320 Query 110650 GTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTA 110709 ||||| || | || |||| || | ||||| || | ||| |||| ||| Sbjct 970319 ATCATTTACCAAGTATCTGTTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTA 970260 Query 110710 GATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGC 110769 || || | || ||| || ||||| ||||| |||||||| |||| ||| || || Sbjct 970259 TATATTCGAAGTTATTGGCTCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGC 970200 Query 110770 TGTTGGCATTGGTGCCATCAA 110790 ||| ||||||||| ||| ||| Sbjct 970199 TGTAGGCATTGGTCCCACCAA 970179 >seq6 Length=1261692 Score = 111 bits (122), Expect = 2e-19 Identities = 197/281 (70%), Gaps = 16/281 (6%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| | ||| || || ||| |||| | || || |||||| | ||||||||| | ||| Sbjct 58493 GTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATCAAACC 58434 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 | ||||||||||||| | || | | |||||| ||||||||||||||||| || ||| Sbjct 58433 TCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCAACAGC 58374 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCAT---CAAACCATTTCAT 122846 ||||| |||| || | || || || || | | | | ||| ||| |||| ||| Sbjct 58373 AGCAAAAGCAACGAGTCTCTCTGC-AAATAGGGCGTCAT--CATCGGCAATCCATCTCAA 58317 Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-TTCA--AATAACT- 122902 ||||| | |||||||||| |||||||| | |||| ||||| || | || |||| Sbjct 58316 AGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAAGAACTC 58257 Query 122903 -GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAA 122942 || || ||| | ||||| ||||| |||| ||||| Sbjct 58256 AGCCTCCTTTGGG-----TCCTTGATGTAGGTGTCGATCAA 58221 Score = 93.3 bits (102), Expect = 5e-14 Identities = 210/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 ||||| || |||||||| || || ||| |||| |||||| || || ||| || | | Sbjct 182245 GCATCGATTTCATCAATAAAAACGATAGATGGGGCATTTTCACGTGCCGTTTTGAATAAA 182304 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749 || || || | |||||| ||||| ||||||||||| ||||| | || | || || Sbjct 182305 TCACGGACACGAGAGGCACCAACACCTACAAACATCTCGACAAACTCTGAACCTGA-AAC 182363 Query 11750 TGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 | || ||||| ||| | |||||| || | || || | ||||||||| || || Sbjct 182364 GGAATAAAATGGAACACCAGCTTCACCAGCAGTAGCCTTAGCCAAGAGGGTCTTACCGGT 182423 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATAT 11866 |||||| ||| | || | || |||| |||||||| |||| |||| ||| Sbjct 182424 ACCTGGAGGACCGGAAAGGATTGCACCTCTTGGGATCTTACCACCCAACTT--TTCATAC 182481 Query 11867 CTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATC 11926 |||| || | || || ||| ||||| ||| | ||| || |||||| | || || Sbjct 182482 TTCTCAGGGTTTTTAAGGAAAGACACAAACTCCATCACTTCTTCCTTGGCCTCTTCCATA 182541 Query 11927 CCCTCAACATC 11937 || ||||||| Sbjct 182542 CCTGCAACATC 182552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031945047200