Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 343 2e-89
seq4 116 5e-21
seq6 111 2e-19
>seq5
Length=1517892
Score = 343 bits (380), Expect = 2e-89
Identities = 936/1410 (66%), Gaps = 51/1410 (4%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
|||||| || | |||||||| ||||| ||||| || | |||||||||||| | || ||
Sbjct 776593 GTAGATATTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGA 776534
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATG----C 110822
||| |||||||||||||| | ||||||| ||| | | ||| | || ||| |
Sbjct 776533 GGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGC 776474
Query 110823 GTTCCTTGAGAAC--ATCCCAGTCGT-AGTTGAGCTTGGTTTCACCTTCCCACATGTCAA 110879
||| |||| | |||||| || ||||| |||| || |||| | |||||
Sbjct 776473 TTTCAATGAGTCCCAATCCCACAAGTCAGTTG-GCTT------ACGACCCCAGAGGTCAA 776421
Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939
| || | || || || || ||||| || |||| ||| |||| ||||| ||||
Sbjct 776420 ATTGCAATTGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTT 776361
Query 110940 CAGCCAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998
|||||| ||| ||| ||||| | | |||| || || ||||||||||| |
Sbjct 776360 GAGCCAACTCAACAGAG-GCCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATG 776302
Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGC 111057
|||| ||| || || |||| || ||||| | | || || ||| || || |||||||
Sbjct 776301 TTCAACTCTTTAGCAGCATCAGACTCAAAAGGCATA-CGTAACATCATGAAGGCATCCGC 776243
Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117
|| ||||| ||||| | |||| ||||||| || ||| ||||| || || |||
Sbjct 776242 AAGGCCTTGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCT-TCTG 776184
Query 111118 -AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
||| || || |||||||||| |||| || ||| | || || |||| | ||| | |
Sbjct 776183 GAACTGGGTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAA 776124
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT-------- 111228
| || || | |||| | | | |||| ||||| ||| || ||||
Sbjct 776123 TATCGTGCAACTTTTGGAAGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGA 776064
Query 111229 ----TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284
||||||||| || |||||||| || |||||||| ||| || | | |||||
Sbjct 776063 AAGCTGGAAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACT 776004
Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344
| | ||| || ||| ||||| ||| ||| || | ||||| ||||| || || ||
Sbjct 776003 CGACAATCTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACT 775944
Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404
| ||||| || ||||| || || |||||| | || || || || || ||||||| | |
Sbjct 775943 TTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCA 775884
Query 111405 GAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT--CCCTCCGCCT 111461
|| || | ||| | | | | | || ||| | | || || | || || |
Sbjct 775883 AGATCGCATACCAGAGCTTTTGAGCCTTC-ACAGT--CTTTCTTCCTTTACCTTCTTGTT 775827
Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521
|||||||||| || | |||||||| || ||||| || || | | || | ||||
Sbjct 775826 CGTACTTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCT 775767
Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTG 111581
| |||| |||| | || ||||| ||| | ||||| ||||||||||| || ||||
Sbjct 775766 CATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTG 775707
Query 111582 GAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGT 111640
||||||||| || || || | ||| | | | | || | ||||| | ||| ||||| |
Sbjct 775706 GAATCCACAAGGCTGGGAACAAATCACGAGCTCTGATC-TCTTCCTTACCGTGGTTCTTT 775648
Query 111641 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 111700
| | || | ||| || | ||||||||||||||||||||| | || | || | |
Sbjct 775647 CTGATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCA 775588
Query 111701 CC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 111756
|| || | | || | |||| | || || | || ||| ||||| || || |
Sbjct 775587 CCTGGTCTCTTGTTACC-ACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGAC 775529
Query 111757 CATTGGAATAATACCATCTGATTGACCATTTGTCCCC-CGAA-TACGAGATT-TATTGGC 111813
||| ||||| | ||||| || ||| || || || ||| || || | || |
Sbjct 775528 CATAGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACT--- 775472
Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873
||| | || || ||||||| || ||||| ||||| ||| ||||| ||||| |
Sbjct 775471 TCTGATATTGTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTG 775412
Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933
| | | || | |||||||| | ||| ||||| ||||| | || | ||||| |||
Sbjct 775411 CTTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGA 775352
Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993
||||||||| || ||||| |||||||||||||| | ||||| | ||||| ||||
Sbjct 775351 GGACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTA 775292
Query 111994 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053
|| || |||||| || ||| || || | || || | || ||| |||||||| ||
Sbjct 775291 ACGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACC 775232
Query 112054 GATTGCGACCCGCATGAACATGTACTGTGG 112083
||| || || ||||| | || || ||||||
Sbjct 775231 GATGGCCACACGCATCACCAAGTGCTGTGG 775202
>seq4
Length=1931745
Score = 116 bits (128), Expect = 5e-21
Identities = 131/173 (76%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 164662
|| ||||||||||||||||| || || ||||| |||||||||||||| |||| |||||
Sbjct 1420697 TACGGTCGTGTTGCACCACGCTCTGGACTCGCGGTGAAGCATGGTATCTCAA-CAGGTGC 1420639
Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722
|||||| ||||| | || || | ||| || |||||||| || | ||||| ||| ||
Sbjct 1420638 CGGTGTTGTTGATGCTGATTACAGAGGCGAGGTCAAAGTGGTGTTGTTCAACCACTCTGA 1420579
Query 164723 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGC 164775
|| ||||| ||| | || ||||| || | || || ||| | || || ||||
Sbjct 1420578 GAAGGACTTCGAGATCAACAAAGGTGACAGAATAGCCCAATTGGTTCTGGAGC 1420526
Score = 113 bits (124), Expect = 6e-20
Identities = 292/441 (66%), Gaps = 8/441 (2%)
Strand=Plus/Minus
Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413
||| ||| || ||||||||||||||| ||||||||||| | ||||||| |||| | |||
Sbjct 970615 GCCATTGTTCTGAGATAGTACATCCCTGTCTTGAGTCCCTTTTTCCATCCGTAGAAGTGC 970556
Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGG 110473
|| || | ||||| | || |||||| |||| | | |||||| ||| ||||
Sbjct 970555 ATGGAGGTTAGCTTCCCAACAGTGGGACTTCTCATGTAAATGTTCATGGATTGGGATTGG 970496
Query 110474 TCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCC 110530
|| ||||| || | || | |||| | ||||| | | | || | || |||
Sbjct 970495 TCGATGAAAGGCGCACGGTCGACCGCGAGGTCAATTA---CTGTGCGCTGAGGGATCTCC 970439
Query 110531 CAAACTGTGCGATAGAGATTCTTGATATCATCTGGGAT-ATCTGAGATATTCTGGATGGA 110589
|| || || || || | || | | | ||| || || | | || |||||||||||
Sbjct 970438 CATACGGTCTTGTACAGCTCTTTCAAAGTCTGTGGAATGATGTCA-ATGTTCTGGATGGA 970380
Query 110590 ACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAG 110649
||| | | | || || ||| ||||||||||| | ||| | |||| || | ||
Sbjct 970379 ACCTTCGTCGTCGACAATTCGATTCTTCATATCCTGGTCCCATAACCCAAGCTCGATAAG 970320
Query 110650 GTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTA 110709
||||| || | || |||| || | ||||| || | ||| |||| |||
Sbjct 970319 ATCATTTACCAAGTATCTGTTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTA 970260
Query 110710 GATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGC 110769
|| || | || ||| || ||||| ||||| |||||||| |||| ||| || ||
Sbjct 970259 TATATTCGAAGTTATTGGCTCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGC 970200
Query 110770 TGTTGGCATTGGTGCCATCAA 110790
||| ||||||||| ||| |||
Sbjct 970199 TGTAGGCATTGGTCCCACCAA 970179
>seq6
Length=1261692
Score = 111 bits (122), Expect = 2e-19
Identities = 197/281 (70%), Gaps = 16/281 (6%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||| | ||| || || ||| |||| | || || |||||| | ||||||||| | |||
Sbjct 58493 GTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATCAAACC 58434
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
| ||||||||||||| | || | | |||||| ||||||||||||||||| || |||
Sbjct 58433 TCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCAACAGC 58374
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCAT---CAAACCATTTCAT 122846
||||| |||| || | || || || || | | | | ||| ||| |||| |||
Sbjct 58373 AGCAAAAGCAACGAGTCTCTCTGC-AAATAGGGCGTCAT--CATCGGCAATCCATCTCAA 58317
Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-TTCA--AATAACT- 122902
||||| | |||||||||| |||||||| | |||| ||||| || | || ||||
Sbjct 58316 AGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAAGAACTC 58257
Query 122903 -GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAA 122942
|| || ||| | ||||| ||||| |||| |||||
Sbjct 58256 AGCCTCCTTTGGG-----TCCTTGATGTAGGTGTCGATCAA 58221
Score = 93.3 bits (102), Expect = 5e-14
Identities = 210/311 (68%), Gaps = 6/311 (2%)
Strand=Plus/Plus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
||||| || |||||||| || || ||| |||| |||||| || || ||| || | |
Sbjct 182245 GCATCGATTTCATCAATAAAAACGATAGATGGGGCATTTTCACGTGCCGTTTTGAATAAA 182304
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749
|| || || | |||||| ||||| ||||||||||| ||||| | || | || ||
Sbjct 182305 TCACGGACACGAGAGGCACCAACACCTACAAACATCTCGACAAACTCTGAACCTGA-AAC 182363
Query 11750 TGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808
| || ||||| ||| | |||||| || | || || | ||||||||| || ||
Sbjct 182364 GGAATAAAATGGAACACCAGCTTCACCAGCAGTAGCCTTAGCCAAGAGGGTCTTACCGGT 182423
Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATAT 11866
|||||| ||| | || | || |||| |||||||| |||| |||| |||
Sbjct 182424 ACCTGGAGGACCGGAAAGGATTGCACCTCTTGGGATCTTACCACCCAACTT--TTCATAC 182481
Query 11867 CTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATC 11926
|||| || | || || ||| ||||| ||| | ||| || |||||| | || ||
Sbjct 182482 TTCTCAGGGTTTTTAAGGAAAGACACAAACTCCATCACTTCTTCCTTGGCCTCTTCCATA 182541
Query 11927 CCCTCAACATC 11937
|| |||||||
Sbjct 182542 CCTGCAACATC 182552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031945047200
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