Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 293 3e-74
seq6 100 4e-16
seq4 84.2 3e-11
>seq5
Length=1517892
Score = 293 bits (324), Expect = 3e-74
Identities = 907/1392 (65%), Gaps = 31/1392 (2%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|||||||| | |||||||||||||| || || |||| |||||||||||| | ||| |||
Sbjct 776592 TAGATATTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAG 776533
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || ||||| ||||| | | ||| ||| | | ||| | | |||| |
Sbjct 776532 GCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCT 776473
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361
|| | | |||||| || | | ||| || | ||| | ||||| || |
Sbjct 776472 TTCAATGAGTCCCAATCCCACAAGTCAGTTGGCTTACGACCCCAGAGGTCAAATTGCAAT 776413
Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421
|| || || ||||| || || || | || || | || ||| | | |||||
Sbjct 776412 TGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAAC 776353
Query 118422 TCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478
|| ||| ||||||| || |||| || || |||||||| || | ||||
Sbjct 776352 TCAACAGAG---GCCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATGTTCAAC 776296
Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538
| || || | || || ||||| | | || ||| || || ||||||| || |||
Sbjct 776295 TCTTTAGCAGCATCAGACTCAAAAGGCATACGTAACATCATGAAGGCATCCGCAAGGCCT 776236
Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGG 118597
|||||||| ||| ||||||| | | |||||| ||||| ||||| ||| | | ||
Sbjct 776235 TGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCT-TCTGGAACTGG 776177
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|| |||| || ||||| | || || | || || || | ||||| | || || ||
Sbjct 776176 GTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAATATCGTG 776117
Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA------------GG 118705
| ||||| | | | | || | ||||| ||| || |||| ||
Sbjct 776116 CAACTTTTGGAAGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGAAAGCTGG 776057
Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765
|||||| || || |||| ||||| |||| ||| || | || |||||| | |||
Sbjct 776056 AAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAAT 775997
Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825
|| |||||||| ||| ||| ||| | ||||||||||| ||||| |||||| ||||
Sbjct 775996 CTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTT 775937
Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885
||| ||||| || ||||||||| |||| || || || || || || | || | || ||
Sbjct 775936 ACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGC 775877
Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945
| ||||| | ||| |||||| | || || |||| |||||||||||
Sbjct 775876 ATACCAGAGCTTTTGAGCCTTCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGT 775817
Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005
|| | |||||||| || ||||| || || | | || | |||| || ||| |
Sbjct 775816 ATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGA 775757
Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065
||| | || ||||| ||| || ||||| ||||||||||| || ||||| ||||| |
Sbjct 775756 GAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAA 775697
Query 119066 CGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 119124
|| | ||| | ||| ||| | || | ||||| | || || || | | || |
Sbjct 775696 GGCTGGGAACAAATCACGAGCTCTGATC-TCTTCCTTACCGTGGTTCTTTCTGATATCGA 775638
Query 119125 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGA 119183
|| || | ||||||||||||||| || |||| ||||| || | || ||| |
Sbjct 775637 TGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCT 775578
Query 119184 CG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
| |||| | |||| || || || |||||| ||||| ||||| | ||| ||||| |
Sbjct 775577 TGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCA 775518
Query 119242 TACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACT-TATTGGCTCTGACATCGT 119298
||||| || || || || || ||| || || || || | ||||| || ||
Sbjct 775517 AACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACT---TCTGATATTGT 775461
Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358
| ||||||| ||| ||||| || || ||| ||||| || || | | | | ||
Sbjct 775460 GAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGT 775401
Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418
||||||| || ||||| ||||| |||| | || | |||||| || ||||| || |
Sbjct 775400 CGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTG 775341
Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACA 119478
| || || |||||||| ||||| | |||||| | ||||| |||| || || ||||
Sbjct 775340 GGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACA 775281
Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538
|| || ||| || || | |||| || ||| ||||| |||||||| | || |
Sbjct 775280 TCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACAC 775221
Query 119539 GCATAAACATGT 119550
|||| | || ||
Sbjct 775220 GCATCACCAAGT 775209
>seq6
Length=1261692
Score = 100 bits (110), Expect = 4e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| | ||| ||||||||| | || | || || |||||| || ||||||||| | |||
Sbjct 58493 GTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATCAAACC 58434
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
| |||||||||||| || || | ||||| || ||||||||||| || || |||
Sbjct 58433 TCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCAACAGC 58374
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205
|| || |||| ||| | ||| ||||| || | | | | | ||| ||| ||| |
Sbjct 58373 AGCAAAAGCAACGAGTCTCTCTGCAAA-TAGGGCGTCATCATCGGCAATCCATCTCAAAG 58315
Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGT 130239
|||| | ||||| |||| |||||| |||| |||
Sbjct 58314 CCCAATCAGCCTTCTTCTTGATACATGGGATGGT 58281
Score = 84.2 bits (92), Expect = 3e-11
Identities = 268/408 (66%), Gaps = 17/408 (4%)
Strand=Plus/Plus
Query 14153 AAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA-- 14209
|| |||||||||||| |||| | ||| |||| || ||| |||||||| || |||
Sbjct 182152 AAACCATCCATCTCAA-CAAGCAATTGGTTGAGTGTGGTTTCACGTTCATCGTTTGCACC 182210
Query 14210 -GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268
| | |||| | || |||||| | ||| || |||||||| || ||||||||
Sbjct 182211 AGAGAAGTTACCCTTTGTACGAGCCTTACCAATGGCATCGATTTCATCAATAAAAACGAT 182270
Query 14269 ACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328
| |||| ||||||||| || || || | ||| || || | |||||| |||||
Sbjct 182271 AGATGGGGCATTTTCACGTGCCGTTTTGAATAAATCACGGACACGAGAGGCACCAACACC 182330
Query 14329 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGAT-GAAGGGGACGTTAGATTCAC 14387
||||||||||| ||||| | | | ||| | | || || || || || |||||
Sbjct 182331 TACAAACATCTCGACAAACTCTGAACCTGAA-ACGGAATAAAATGGAACACCAGCTTCAC 182389
Query 14388 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCAC 14447
| || | || || | ||||||||| || || ||||| || | || | ||||
Sbjct 182390 CAGCAGTAGCCTTAGCCAAGAGGGTCTTACCGGTACCTGGAGGACCGGAAAGGATTGCAC 182449
Query 14448 CACGTGGGATCCTGGCACCACTGCCAAAGTAGCGT-----TCAGGTTGTTTAAGGAAGTC 14502
| | ||||||| | ||||| |||| | | | ||||| | |||||||||
Sbjct 182450 CTCTTGGGATCTT---ACCAC--CCAACTTTTCATACTTCTCAGGGTTTTTAAGGAAAGA 182504
Query 14503 CACGATTTCTTCCAATTCATCCTTCGCGGCGTCGATGCCTTCAACGTC 14550
||| | || || ||| ||||| || | || || ||| |||| ||
Sbjct 182505 CACAAACTCCATCACTTCTTCCTTGGCCTCTTCCATACCTGCAACATC 182552
>seq4
Length=1931745
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 167949 TACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGCG 168008
|||||||| || || ||| | ||||||||||| |||||| ||||||| | |||||
Sbjct 1420697 TACGGTCGTGTTGCACCACGCTCTGGACTCGCGGTGAAGCATGGTATCTCAACAGGTGCC 1420638
Query 168009 GGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 168062
|||||||||||| | || || | || || |||||||| || | ||||| |||
Sbjct 1420637 GGTGTTGTTGATGCTGATTACAGAGGCGAGGTCAAAGTGGTGTTGTTCAACCAC 1420584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435145886920
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