Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 293 3e-74 seq6 100 4e-16 seq4 84.2 3e-11 >seq5 Length=1517892 Score = 293 bits (324), Expect = 3e-74 Identities = 907/1392 (65%), Gaps = 31/1392 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 |||||||| | |||||||||||||| || || |||| |||||||||||| | ||| ||| Sbjct 776592 TAGATATTAGAAGTGTATGGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAG 776533 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| ||||| | | ||| ||| | | ||| | | |||| | Sbjct 776532 GCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCT 776473 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 || | | |||||| || | | ||| || | ||| | ||||| || | Sbjct 776472 TTCAATGAGTCCCAATCCCACAAGTCAGTTGGCTTACGACCCCAGAGGTCAAATTGCAAT 776413 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 || || || ||||| || || || | || || | || ||| | | ||||| Sbjct 776412 TGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAAC 776353 Query 118422 TCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478 || ||| ||||||| || |||| || || |||||||| || | |||| Sbjct 776352 TCAACAGAG---GCCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATGTTCAAC 776296 Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538 | || || | || || ||||| | | || ||| || || ||||||| || ||| Sbjct 776295 TCTTTAGCAGCATCAGACTCAAAAGGCATACGTAACATCATGAAGGCATCCGCAAGGCCT 776236 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGG 118597 |||||||| ||| ||||||| | | |||||| ||||| ||||| ||| | | || Sbjct 776235 TGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCT-TCTGGAACTGG 776177 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || |||| || ||||| | || || | || || || | ||||| | || || || Sbjct 776176 GTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAATATCGTG 776117 Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA------------GG 118705 | ||||| | | | | || | ||||| ||| || |||| || Sbjct 776116 CAACTTTTGGAAGTTATAAGTTTGAGTCAAACCATCAACCGACTTCTCAATGAAAGCTGG 776057 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 |||||| || || |||| ||||| |||| ||| || | || |||||| | ||| Sbjct 776056 AAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAAT 775997 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 || |||||||| ||| ||| ||| | ||||||||||| ||||| |||||| |||| Sbjct 775996 CTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTT 775937 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||| ||||| || ||||||||| |||| || || || || || || | || | || || Sbjct 775936 ACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGC 775877 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 | ||||| | ||| |||||| | || || |||| ||||||||||| Sbjct 775876 ATACCAGAGCTTTTGAGCCTTCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGT 775817 Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005 || | |||||||| || ||||| || || | | || | |||| || ||| | Sbjct 775816 ATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGA 775757 Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 ||| | || ||||| ||| || ||||| ||||||||||| || ||||| ||||| | Sbjct 775756 GAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAA 775697 Query 119066 CGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 119124 || | ||| | ||| ||| | || | ||||| | || || || | | || | Sbjct 775696 GGCTGGGAACAAATCACGAGCTCTGATC-TCTTCCTTACCGTGGTTCTTTCTGATATCGA 775638 Query 119125 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGA 119183 || || | ||||||||||||||| || |||| ||||| || | || ||| | Sbjct 775637 TGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCT 775578 Query 119184 CG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 | |||| | |||| || || || |||||| ||||| ||||| | ||| ||||| | Sbjct 775577 TGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCA 775518 Query 119242 TACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACT-TATTGGCTCTGACATCGT 119298 ||||| || || || || || ||| || || || || | ||||| || || Sbjct 775517 AACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACT---TCTGATATTGT 775461 Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 | ||||||| ||| ||||| || || ||| ||||| || || | | | | || Sbjct 775460 GAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGT 775401 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 ||||||| || ||||| ||||| |||| | || | |||||| || ||||| || | Sbjct 775400 CGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTG 775341 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACA 119478 | || || |||||||| ||||| | |||||| | ||||| |||| || || |||| Sbjct 775340 GGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACA 775281 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 || || ||| || || | |||| || ||| ||||| |||||||| | || | Sbjct 775280 TCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACAC 775221 Query 119539 GCATAAACATGT 119550 |||| | || || Sbjct 775220 GCATCACCAAGT 775209 >seq6 Length=1261692 Score = 100 bits (110), Expect = 4e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | ||| ||||||||| | || | || || |||||| || ||||||||| | ||| Sbjct 58493 GTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATCAAACC 58434 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 | |||||||||||| || || | ||||| || ||||||||||| || || ||| Sbjct 58433 TCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCAACAGC 58374 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205 || || |||| ||| | ||| ||||| || | | | | | ||| ||| ||| | Sbjct 58373 AGCAAAAGCAACGAGTCTCTCTGCAAA-TAGGGCGTCATCATCGGCAATCCATCTCAAAG 58315 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGT 130239 |||| | ||||| |||| |||||| |||| ||| Sbjct 58314 CCCAATCAGCCTTCTTCTTGATACATGGGATGGT 58281 Score = 84.2 bits (92), Expect = 3e-11 Identities = 268/408 (66%), Gaps = 17/408 (4%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA-- 14209 || |||||||||||| |||| | ||| |||| || ||| |||||||| || ||| Sbjct 182152 AAACCATCCATCTCAA-CAAGCAATTGGTTGAGTGTGGTTTCACGTTCATCGTTTGCACC 182210 Query 14210 -GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 | | |||| | || |||||| | ||| || |||||||| || |||||||| Sbjct 182211 AGAGAAGTTACCCTTTGTACGAGCCTTACCAATGGCATCGATTTCATCAATAAAAACGAT 182270 Query 14269 ACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 | |||| ||||||||| || || || | ||| || || | |||||| ||||| Sbjct 182271 AGATGGGGCATTTTCACGTGCCGTTTTGAATAAATCACGGACACGAGAGGCACCAACACC 182330 Query 14329 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGAT-GAAGGGGACGTTAGATTCAC 14387 ||||||||||| ||||| | | | ||| | | || || || || || ||||| Sbjct 182331 TACAAACATCTCGACAAACTCTGAACCTGAA-ACGGAATAAAATGGAACACCAGCTTCAC 182389 Query 14388 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCAC 14447 | || | || || | ||||||||| || || ||||| || | || | |||| Sbjct 182390 CAGCAGTAGCCTTAGCCAAGAGGGTCTTACCGGTACCTGGAGGACCGGAAAGGATTGCAC 182449 Query 14448 CACGTGGGATCCTGGCACCACTGCCAAAGTAGCGT-----TCAGGTTGTTTAAGGAAGTC 14502 | | ||||||| | ||||| |||| | | | ||||| | ||||||||| Sbjct 182450 CTCTTGGGATCTT---ACCAC--CCAACTTTTCATACTTCTCAGGGTTTTTAAGGAAAGA 182504 Query 14503 CACGATTTCTTCCAATTCATCCTTCGCGGCGTCGATGCCTTCAACGTC 14550 ||| | || || ||| ||||| || | || || ||| |||| || Sbjct 182505 CACAAACTCCATCACTTCTTCCTTGGCCTCTTCCATACCTGCAACATC 182552 >seq4 Length=1931745 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 167949 TACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGCG 168008 |||||||| || || ||| | ||||||||||| |||||| ||||||| | ||||| Sbjct 1420697 TACGGTCGTGTTGCACCACGCTCTGGACTCGCGGTGAAGCATGGTATCTCAACAGGTGCC 1420638 Query 168009 GGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 168062 |||||||||||| | || || | || || |||||||| || | ||||| ||| Sbjct 1420637 GGTGTTGTTGATGCTGATTACAGAGGCGAGGTCAAAGTGGTGTTGTTCAACCAC 1420584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435145886920