Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 2e-32
seq4 100 3e-16
>seq5
Length=1517892
Score = 154 bits (170), Expect = 2e-32
Identities = 334/489 (68%), Gaps = 12/489 (2%)
Strand=Plus/Plus
Query 19166 GAGACATACGACCTGATGAGCCAGAA-GTT-CTTCACGCACGCGACGCCGACCCTTTTCA 19223
|| || ||| |||||||| | ||| ||| |||||| ||||| | || || | ||||
Sbjct 775265 GAAACTTACAACCTGATGT--CTGAACGTTACTTCACACACGCTTCTCCAACTTTGTTCA 775322
Query 19224 ACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACA 19283
| || ||||| | ||| |||||||| |||||||| || ||||||||||| |||
Sbjct 775323 ATGCTGGTACTCCAAGCCCACAGATGTCCTCTTGTTTCCTCGTTGCTATGAAGGAAGACT 775382
Query 19284 GCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGG 19343
||| || || |||||||| || | ||| | || || ||||| ||| | || |
Sbjct 775383 CCATCGAAGGTATCTACGACACCTTGAAGCAATGTGCCTTGATCTCTAAGACCGCTGGTG 775442
Query 19344 GTATCGGGATCCAC-TGCTCGAATATCCG--GTCGAGTGGTAC-ACGAATCAATGGGACG 19399
||||||| | ||| | | | |||||| | || || ||| | || ||| ||| ||
Sbjct 775443 GTATCGGTTTGCACATTCAC-AATATCAGAAGTACAG-GGTCCTAC--ATCGCTGGTACC 775498
Query 19400 AACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTAC 19459
||||| | | ||| | | || ||| |||| ||||| || ||||| || || |||
Sbjct 775499 AACGGTACCTCTAATGGTTTGATTCCTATGGTCCGTGTCTTTAATAACACTGCAAGATAC 775558
Query 19460 GTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCAC 19519
||| |||| || || ||| | || | || ||| | ||| | ||||||||||||
Sbjct 775559 GTCGACCAAGGTGGTAACAAGAGACCAGGTGCATTTGCCTTGTACTTGGAGCCATGGCAC 775618
Query 19520 GCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGT 19579
||||| || | |||||| |||| | | |||||| ||| | || ||||| | |
Sbjct 775619 GCGGATATCTTTGATTTCATCGATATCAGAAAGAACCACGGTAAGGAAGAGATCAGAGCT 775678
Query 19580 CGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639
|| || | ||| | |||||||||||||| || || |||||| || ||||| || ||
Sbjct 775679 CGTGATTTGTTCCCAGCCTTGTGGATTCCAGATCTGTTCATGAAGCGTGTTGAACAGAAC 775738
Query 19640 GAAGAATGG 19648
| ||||||
Sbjct 775739 GGTGAATGG 775747
Score = 122 bits (134), Expect = 1e-22
Identities = 294/439 (67%), Gaps = 11/439 (3%)
Strand=Plus/Plus
Query 20390 GTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAG 20449
|| || || ||||| || ||||| || | || ||| |||| ||||||| ||| |||
Sbjct 776513 GTTGCACCAATGCCAACTGCCTCTACATCTCAAATCTTGGGTTACAACGAATGTTTTGAG 776572
Query 20450 CCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAAC 20509
|| ||||| | || ||||||| |||||| || |||||||| ||| || || |||
Sbjct 776573 CCATACACTTCTAATATCTACTCTCGTCGTGTTCTTGCCGGTGAATTCCAGATTGTGAAC 776632
Query 20510 AAGCACCTGGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAA 20569
|| || | || || ||| | | | ||| ||| | ||| ||||| |
Sbjct 776633 CCATACTTGCTGCGTGATTTGGTTGACTTGGGTATCTGGGATGACGCAATGAAGAACCAC 776692
Query 20570 AT--TGTCCGAGCCGGCGGGAGCGTCCAGGCATTGG---ATATCCCCCAGAACCTCAAGG 20624
|| | ||||| | ||| | |||| ||| | || || || | | ||||
Sbjct 776693 ATCATATCCGA--CAACGGTTCCATCCAAAACTTGCCAAACATTCCAAAGCAATTGAAGG 776750
Query 20625 ACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATC 20684
|| | |||| |||||||||||||||| | || |||| |||||| || ||||| |||||||
Sbjct 776751 ACTTGTACAAGACCGTATGGGAAATCTCTCAAAAGACCATCATTGATATGGCTGCCGATC 776810
Query 20685 GCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCAT-GGAGAATCCGAGCC-T 20742
| | || ||||||||||| || || || | || ||||| ||| || | || |
Sbjct 776811 GTGCTGCTTACATCGACCAATCTCAATCTTTGAA--CATTCATATCAGAGCCCCAACCAT 776868
Query 20743 GGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTA 20802
|| || || | || ||||| | ||||||||| | ||||| | ||||| || |||||
Sbjct 776869 GGGTAAACTCACGTCGATGCACTTCTACGGCTGGAAGAAGGGCTTGAAGACCGGTATGTA 776928
Query 20803 CTATCTGCGGACCCGAGCC 20821
||| || | || | ||||
Sbjct 776929 CTACTTGAGAACACAAGCC 776947
Score = 107 bits (118), Expect = 2e-18
Identities = 550/860 (64%), Gaps = 18/860 (2%)
Strand=Plus/Minus
Query 79036 ATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAA 79095
||||||| || ||| | ||||||| ||| || || || |||||| || |||
Sbjct 776067 ATGAAAGCTGGAAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAG 776008
Query 79096 ACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTG 79155
||||| || || ||||| || || ||||||||| | || | ||||||||| |||
Sbjct 776007 TACTCGACAATCTCACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTG 775948
Query 79156 CTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTC 79215
||| | |||||| || || || || |||| | || || || || ||| ||| |
Sbjct 775947 GACTTTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCC 775888
Query 79216 TTGA-GAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCG--ACCCTGT 79272
| | || ||| | ||||| | | ||| ||| ||| | | || ||| | |
Sbjct 775887 TCCAAGATCGCA-TACCAGAGCTTTTGAGCCTTCACAGTCTT--TCTTCCTTTACCTTCT 775831
Query 79273 GCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG 79332
||||| | ||||| | | || | || ||||| |||| | || ||| |
Sbjct 775830 TGTTCGTACTTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTA 775771
Query 79333 CACTCGTGCGGGCACA-TCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAG 79391
||| | || | | | | || ||| || ||| || ||||| || |||||| ||
Sbjct 775770 GCCTCATTTGGAGAGAATAAAGT-CCATTCACCGTTCTGTTCAACACGCTTCATGAACAG 775712
Query 79392 GTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTT 79451
|| || ||||||| ||| | ||| | || || | ||||| || | || |||||
Sbjct 775711 ATCTGGAATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTT 775652
Query 79452 CAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAA 79511
| | | |||| || || | ||| || |||||||| ||||||| || | ||| ||
Sbjct 775651 CTTTCTGATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAA 775592
Query 79512 CGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCG 79571
| ||| | |||| || || |||| |||||| | || ||||| || || || ||
Sbjct 775591 TGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACG 775532
Query 79572 GAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGT-GTACCGCTCG 79630
|| ||| || | | || | | | ||||| || || ||| || | ||| ||
Sbjct 775531 GACCATAGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGAT--GTAGGACC-CTGT 775475
Query 79631 CC--CGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGC 79687
| | || || | | | ||| | ||||| || || | ||| ||||| || |
Sbjct 775474 ACTTCTGATATT-GTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCAC 775416
Query 79688 ACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC 79747
| | ||| | || |||||||| || ||||| ||||| ||||||||||| || ||||| |
Sbjct 775415 ATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAAC 775356
Query 79748 AGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGA 79807
| |||||||||||| | ||||| || ||||| | || || | ||||| ||||
Sbjct 775355 AAGAGGACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGA 775296
Query 79808 AG-AACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGG 79866
|| ||| || | |||||| | ||| || || | ||| | | || ||||||
Sbjct 775295 AGTAACGTTCAG-ACATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGG 775237
Query 79867 ATGCCGACCGCGACGCGCAT 79886
|| |||| || || |||||
Sbjct 775236 ATACCGATGGCCACACGCAT 775217
Score = 104 bits (114), Expect = 3e-17
Identities = 145/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||||| ||| |||||||| || ||||| | ||||||||||| ||||| | ||||||
Sbjct 776942 GTGTTCTCAAGTAGTACATACCGGTCTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCG 776883
Query 78248 TCGACAGCTTGGCCA-GACTCGGGTTCTCC-ATGAAGATGTTGAGCGACTGGGACTGGTC 78305
|| || || ||| | | ||| ||| ||||| |||| | || || || |||||
Sbjct 776882 ACGTGAGTTTACCCATGGTTGGGGCTCTGATATGAA--TGTTCAAAGATTGAGATTGGTC 776825
Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365
|||||| ||| | || ||||| ||||| || |||| | |||||| | || ||||| |
Sbjct 776824 GATGTAAGCAGCACGATCGGCAGCCATATCAATGATGGTCTTTTGAGAGATTTCCCATAC 776765
Query 78366 GGTCCGGTAAATGGCCTTCA 78385
|||| ||| | | ||||||
Sbjct 776764 GGTCTTGTACAAGTCCTTCA 776745
>seq4
Length=1931745
Score = 100 bits (110), Expect = 3e-16
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689
|||| |||||||||||| ||||| ||| | | || ||| | |||| ||| || ||
Sbjct 970425 TACAAGACCGTATGGGAGATCCCTCAGCGCACAGTAATTGACCTCGCGGTCGACCG-TGC 970483
Query 20690 GCC-TACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAA-TCCGAGCCTGGCGA 20747
||| | ||||||||| ||||| || | || | | ||| ||||| ||| | | | ||
Sbjct 970484 GCCTTTCATCGACCAATCCCAATCCATGAACATTTACAT-GAGAAGTCCCACTGTTGGGA 970542
Query 20748 AGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATC 20807
|||| | ||||||||| | ||||| ||| | ||||| |||||||| || ||||||||||
Sbjct 970543 AGCTAACCTCCATGCACTTCTACGGATGGAAAAAGGGACTCAAGACAGGGATGTACTATC 970602
Query 20808 T 20808
|
Sbjct 970603 T 970603
Score = 87.8 bits (96), Expect = 2e-12
Identities = 301/462 (65%), Gaps = 8/462 (2%)
Strand=Plus/Minus
Query 78189 TGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACT 78248
||||| | ||||||||| || |||||||| ||||| ||||||||||| | ||||||
Sbjct 970610 TGTTCTGAGATAGTACATCCCTGTCTTGAGTCCCTTTTTCCATCCGTAGAAGTGCATGGA 970551
Query 78249 CGACAGCTTGGCCAGACTCGG-GTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| ||||| | | | | || |||| |||| | ||||| | || ||||| |||||||
Sbjct 970550 GGTTAGCTTCCCAACAGTGGGACTTCT-CATGTAAATGTTCATGGATTGGGATTGGTCGA 970492
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|| | | | |||||| |||| | ||| || || | || || |||||||| | ||
Sbjct 970491 TGAAAGGCGCACGGTCGACCGCGAGGTCAATTACTGTGCGCTGAGGGATCTCCCATACGG 970432
Query 78368 TCCGGTAAATGGCCTTCA---GCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGG 78424
|| ||| | | |||| || | |||||| | || | | || ||
Sbjct 970431 TCTTGTACAGCTCTTTCAAAGTCTGTGGAATGATGTCAATGTTCTGGATGGAACCTTCGT 970372
Query 78425 C-TCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGG 78483
| ||| |||||| |||||| || | ||| ||| | || ||||||
Sbjct 970371 CGTCG-ACAATTCGATTCTTCATATCCTGGTCCCATAACCCAAGCTCGATAAGATCATTT 970313
Query 78484 ACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543
|||| || | ||||| || ||||||||| | || || || ||| || ||
Sbjct 970312 ACCAAGTATCTGTTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTATATATTC 970253
Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603
| || |||||||| ||| ||| ||||| |||||| | |||||| || || |||
Sbjct 970252 GAAGTTATTGGCTCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGCTGTAGGC 970193
Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCAT-GCGTCTT 78644
|| ||| | |||| || ||| |||| || |||| |||| ||
Sbjct 970192 ATTGGTCCCACCAATAAAGAGTTCCTTAGTCCATAGCGTTTT 970151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524752004080
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