Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 3e-29
seq4 98.7 1e-15
>seq5
Length=1517892
Score = 143 bits (158), Expect = 3e-29
Identities = 296/433 (68%), Gaps = 8/433 (2%)
Strand=Plus/Plus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
||||| || ||||| | ||||| ||||||| |||||||| ||| ||||||||
Sbjct 775292 TACTTCACACACGCTTCTCCAACTTTGTTCAATGCTGGTACTCCAAGCCCACAGATGTCC 775351
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||||| || || |||||||| ||||| ||||| || |||||||| || | |||
Sbjct 775352 TCTTGTTTCCTCGTTGCTATGAAGGAAGACTCCATCGAAGGTATCTACGACACCTTGAAG 775411
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448
| |||||| ||||| ||| | |||||||||||| | ||| | | | || || |
Sbjct 775412 CAATGTGCCTTGATCTCTAAGACCGCTGGTGGTATCGGTTTGCACATTCAC-AATATCAG 775470
Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508
| || | ||| || || ||||| | | |||| | | |||||| |
Sbjct 775471 AAGTACAGGGTCCTACATCGCTGGTACCAACGGTACCTCTAATGGTTTGATTCCTATGGT 775530
Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGT 53567
||| ||||| || ||||| || | |||||| |||| |||||| ||| | | ||| |
Sbjct 775531 CCGTGTCTTTAATAACACTGCAAGATACGTCGACCAAGGTGGTAACAAGAGACCAGGTG- 775589
Query 53568 CGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTC 53627
| || ||| | ||| | ||||| |||||||| || || | || || |||| | |
Sbjct 775590 CATTTGCCTTGTACTTGGAGCCATGGCACGCGGATATCTTTGATTTCATCGATATCAGAA 775649
Query 53628 TGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCC 53685
||| || ||| | |||||||| | ||| ||||| |||| |||| ||||||||||
Sbjct 775650 AGAACCACGGTAAGGAAGAGATCAGAGCT--CGTGATTTGTTCCCAGCCTTGTGGATTCC 775707
Query 53686 GGACCTCTTCATG 53698
|| || ||||||
Sbjct 775708 AGATCTGTTCATG 775720
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 55730 AAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCT 55789
||||| | ||| ||| || ||||| || | || |||| | ||||| ||| |||
Sbjct 776747 AAGGACTTGTACAAGACCGTATGGGAAATCTCTCAAAAGACCATCATTGATATGGCTGCC 776806
Query 55790 GATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCA 55849
||||||| ||| ||||||||||| || || ||| ||||||| |||| | || |
Sbjct 776807 GATCGTGCTGCTTACATCGACCAATCTCAATCTTTGAACAT--TCATATCAGAGCCCCAA 776864
Query 55850 C--TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
| ||| || | | ||||||||||| ||||| ||||||||||| | ||||| ||||
Sbjct 776865 CCATGGGTAAACTCACGTCGATGCACTTCTACGGCTGGAAGAAGGGCTTGAAGACCGGTA 776924
Query 55908 TGTACTA 55914
|||||||
Sbjct 776925 TGTACTA 776931
>seq4
Length=1931745
Score = 98.7 bits (108), Expect = 1e-15
Identities = 163/230 (71%), Gaps = 9/230 (4%)
Strand=Plus/Plus
Query 55694 GGGTCCGTCCAGAATCTGGAGAT---TCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750
|| ||| ||||||| | || || ||| | | | | || ||| | ||| ||| ||
Sbjct 970377 GGTTCCATCCAGAACATTGACATCATTCCACAGACTTTGAAAGAGCTGTACAAGACCGTA 970436
Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810
|||||||| || ||| | | |||||| | | || |||| | | |||||||
Sbjct 970437 TGGGAGATCCCTCAGCGCACAGTAATTGACCTCGCGGTCGACCGTGCGCCTTTCATCGAC 970496
Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAA-TCCTTCACTG--GCCAAGTTGAGCTCG 55867
|| ||||| || ||||||| | |||| |||| ||| ||||| | ||| | | |||
Sbjct 970497 CAATCCCAATCCATGAACATTTACATG-AGAAGTCC--CACTGTTGGGAAGCTAACCTCC 970553
Query 55868 ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCT 55917
|||||||| ||||| ||||| |||||||||||||| || |||||||||||
Sbjct 970554 ATGCACTTCTACGGATGGAAAAAGGGACTCAAGACAGGGATGTACTATCT 970603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215952118600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |