Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 143 3e-29 seq4 98.7 1e-15 >seq5 Length=1517892 Score = 143 bits (158), Expect = 3e-29 Identities = 296/433 (68%), Gaps = 8/433 (2%) Strand=Plus/Plus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || ||||| | ||||| ||||||| |||||||| ||| |||||||| Sbjct 775292 TACTTCACACACGCTTCTCCAACTTTGTTCAATGCTGGTACTCCAAGCCCACAGATGTCC 775351 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||||| || || |||||||| ||||| ||||| || |||||||| || | ||| Sbjct 775352 TCTTGTTTCCTCGTTGCTATGAAGGAAGACTCCATCGAAGGTATCTACGACACCTTGAAG 775411 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 | |||||| ||||| ||| | |||||||||||| | ||| | | | || || | Sbjct 775412 CAATGTGCCTTGATCTCTAAGACCGCTGGTGGTATCGGTTTGCACATTCAC-AATATCAG 775470 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508 | || | ||| || || ||||| | | |||| | | |||||| | Sbjct 775471 AAGTACAGGGTCCTACATCGCTGGTACCAACGGTACCTCTAATGGTTTGATTCCTATGGT 775530 Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGT 53567 ||| ||||| || ||||| || | |||||| |||| |||||| ||| | | ||| | Sbjct 775531 CCGTGTCTTTAATAACACTGCAAGATACGTCGACCAAGGTGGTAACAAGAGACCAGGTG- 775589 Query 53568 CGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTC 53627 | || ||| | ||| | ||||| |||||||| || || | || || |||| | | Sbjct 775590 CATTTGCCTTGTACTTGGAGCCATGGCACGCGGATATCTTTGATTTCATCGATATCAGAA 775649 Query 53628 TGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCC 53685 ||| || ||| | |||||||| | ||| ||||| |||| |||| |||||||||| Sbjct 775650 AGAACCACGGTAAGGAAGAGATCAGAGCT--CGTGATTTGTTCCCAGCCTTGTGGATTCC 775707 Query 53686 GGACCTCTTCATG 53698 || || |||||| Sbjct 775708 AGATCTGTTCATG 775720 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 55730 AAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCT 55789 ||||| | ||| ||| || ||||| || | || |||| | ||||| ||| ||| Sbjct 776747 AAGGACTTGTACAAGACCGTATGGGAAATCTCTCAAAAGACCATCATTGATATGGCTGCC 776806 Query 55790 GATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCA 55849 ||||||| ||| ||||||||||| || || ||| ||||||| |||| | || | Sbjct 776807 GATCGTGCTGCTTACATCGACCAATCTCAATCTTTGAACAT--TCATATCAGAGCCCCAA 776864 Query 55850 C--TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | ||| || | | ||||||||||| ||||| ||||||||||| | ||||| |||| Sbjct 776865 CCATGGGTAAACTCACGTCGATGCACTTCTACGGCTGGAAGAAGGGCTTGAAGACCGGTA 776924 Query 55908 TGTACTA 55914 ||||||| Sbjct 776925 TGTACTA 776931 >seq4 Length=1931745 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/230 (71%), Gaps = 9/230 (4%) Strand=Plus/Plus Query 55694 GGGTCCGTCCAGAATCTGGAGAT---TCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750 || ||| ||||||| | || || ||| | | | | || ||| | ||| ||| || Sbjct 970377 GGTTCCATCCAGAACATTGACATCATTCCACAGACTTTGAAAGAGCTGTACAAGACCGTA 970436 Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810 |||||||| || ||| | | |||||| | | || |||| | | ||||||| Sbjct 970437 TGGGAGATCCCTCAGCGCACAGTAATTGACCTCGCGGTCGACCGTGCGCCTTTCATCGAC 970496 Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAA-TCCTTCACTG--GCCAAGTTGAGCTCG 55867 || ||||| || ||||||| | |||| |||| ||| ||||| | ||| | | ||| Sbjct 970497 CAATCCCAATCCATGAACATTTACATG-AGAAGTCC--CACTGTTGGGAAGCTAACCTCC 970553 Query 55868 ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCT 55917 |||||||| ||||| ||||| |||||||||||||| || ||||||||||| Sbjct 970554 ATGCACTTCTACGGATGGAAAAAGGGACTCAAGACAGGGATGTACTATCT 970603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215952118600