Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 4e-28
seq3 136 5e-27
seq5 120 3e-22
seq4 107 2e-18
>seq1
Length=2451740
Score = 140 bits (154), Expect = 4e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| | ||||| ||||| ||||| | ||||||||||| ||| | |||
Sbjct 160480 CTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCAT 160539
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | ||| | || || || ||||||||||| ||||| |||||||| || | |
Sbjct 160540 TGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATT 160599
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| ||||||||||||||| | ||||||| | ||| | | ||||| || |||||||
Sbjct 160600 GATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAA 160659
Query 27594 GGAATCCACTCTTCA 27608
||| |||||||||||
Sbjct 160660 GGAGTCCACTCTTCA 160674
>seq3
Length=2123196
Score = 136 bits (150), Expect = 5e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || ||||| || ||||| ||||| | |||||||||||
Sbjct 1815740 ATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCCTCC 1815681
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || || |||||||| ||||| || || ||||||||
Sbjct 1815680 GACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCAA 1815621
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| ||||||||| | ||||||| | | || | | ||||| ||
Sbjct 1815620 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAAC 1815561
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||||||||| |||||||||||
Sbjct 1815560 ATCCAAAAGGAGTCCACTCTTCA 1815538
>seq5
Length=1517892
Score = 120 bits (132), Expect = 3e-22
Identities = 132/172 (77%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTT- 80105
|||||||| || ||||| | |||||||||||||||||| | |||||| || |||| ||
Sbjct 776931 TAGTACATACCGGTCTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTA 776872
Query 80106 CGCAAGTGTGGGGTTCTCC-ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCC 80164
| || | ||||| ||| ||||| |||||| ||| ||||| || |||| ||||
Sbjct 776871 CCCATGGTTGGGGCTCTGATATGAA--TGTTCAAAGATTGAGATTGGTCGATGTAAGCAG 776814
Query 80165 CACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216
||||||| || ||||| ||||| || | |||||| | ||||||||||| ||
Sbjct 776813 CACGATCGGCAGCCATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGT 776762
>seq4
Length=1931745
Score = 107 bits (118), Expect = 2e-18
Identities = 118/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511
||||||| || ||| | ||||| || | ||| | || || |||||||||||||| |
Sbjct 933916 AGGTTGAATCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTA 933857
Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571
|||| ||||||||||| | | ||||| |||||||| ||| | ||||||| | |||
Sbjct 933856 TTCCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAGGATGGCAGAACCT 933797
Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
| | ||||| || | |||||||| |||||||||||
Sbjct 933796 TGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCA 933760
Score = 100 bits (110), Expect = 3e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103
||||||||||| || |||||||| ||||| ||||| ||||| | |||||| || | |||
Sbjct 970603 AGATAGTACATCCCTGTCTTGAGTCCCTTTTTCCATCCGTAGAAGTGCATGGAGGTTAGC 970544
Query 80104 TTCGCAAGTGTGGG-GTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGC 80162
||| ||| ||||| |||| |||| | ||||||| || || || || ||||||||
Sbjct 970543 TTCCCAACAGTGGGACTTCT-CATGTAAATGTTCATGGATTGGGATTGGTCGATGAAAGG 970485
Query 80163 CCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216
| |||| || |||| | ||||| | || || || || |||||||| ||
Sbjct 970484 CGCACGGTCGACCGCGAGGTCAATTACTGTGCGCTGAGGGATCTCCCATACGGT 970431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310350097840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |