Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 2e-16
seq1 89.7 3e-13
>seq3
Length=2123196
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| || |||||| ||||||||| ||||| || || || | |||| | || ||
Sbjct 1815532 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 1815591
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| ||||||||||| || || | |||||||| || || | ||||| ||||| |
Sbjct 1815592 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTGG 1815651
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
||| || | || ||| | ||| ||||| | ||| || |||| ||| || || ||
Sbjct 1815652 ATC-TTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAAGGTAATGGTCTT 1815710
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713
||| || | ||||| || ||||| ||||| ||| ||
Sbjct 1815711 ACCTGTAAGGGTTTTGACGAAAATTTGCATCTTGGTT 1815747
>seq1
Length=2451740
Score = 89.7 bits (98), Expect = 3e-13
Identities = 142/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| || |||||| ||||||||| ||||| || || || | |||| | || ||
Sbjct 160680 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCCTCC 160621
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| ||||| ||||| || || | |||||||| || || | |||||||||||| |
Sbjct 160620 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 160561
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
||| || | || || | ||| ||||| | ||| || |||| ||| || || ||
Sbjct 160560 ATC-TTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTT 160502
Query 34677 ACCGGTTAACGTTTTCACAAA 34697
|||||| || || || || ||
Sbjct 160501 ACCGGTCAAGGTCTTAACGAA 160481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729573149631
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |