Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
seq1 93.3 4e-14
seq4 84.2 2e-11
>seq3
Length=2123196
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || || || ||| | ||||| | || || || | |||
Sbjct 1815740 ATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCCTCC 1815681
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || |||||||| || || ||||| || |||
Sbjct 1815680 GACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCAA 1815621
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||||| || |||||||| || || || | || || ||||||
Sbjct 1815620 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAAC 1815561
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || | || |||||| | | ||| | |||||
Sbjct 1815560 ATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 1815514
>seq1
Length=2451740
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || ||||||| ||| | ||||| | || || || | || ||| | |||
Sbjct 160481 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 160540
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || |||||||| || || || ||||| || ||||| | ||
Sbjct 160541 GACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTG 160600
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||| || | ||| | || || |||||||| ||||||
Sbjct 160601 ATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAG 160660
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || | || |||||| | | ||| | ||||| ||
Sbjct 160661 GAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGTAT 160701
>seq4
Length=1931745
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 27036 GTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATA 27095
|| ||| | || ||| | ||||| | ||||| || || || ||||| || || ||
Sbjct 933914 GTTGAATCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATT 933855
Query 27096 CCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT 27155
||||| || || || | || || | ||| || ||||||||||| || | ||| |
Sbjct 933854 CCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAGGATGGCAGAACCTTG 933795
Query 27156 TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||||||||||| || | || |||||| | | ||| | |||||
Sbjct 933794 TCTGACTACAACATTCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGG 933736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918361944640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |