Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq1 93.3 4e-14 seq4 84.2 2e-11 >seq3 Length=2123196 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || || ||| | ||||| | || || || | ||| Sbjct 1815740 ATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCCTCC 1815681 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || |||||||| || || ||||| || ||| Sbjct 1815680 GACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCAA 1815621 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||||| || |||||||| || || || | || || |||||| Sbjct 1815620 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAAC 1815561 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || | || |||||| | | ||| | ||||| Sbjct 1815560 ATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 1815514 >seq1 Length=2451740 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || ||||||| ||| | ||||| | || || || | || ||| | ||| Sbjct 160481 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 160540 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || |||||||| || || || ||||| || ||||| | || Sbjct 160541 GACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTG 160600 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || |||||||| || | ||| | || || |||||||| |||||| Sbjct 160601 ATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAG 160660 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || | || |||||| | | ||| | ||||| || Sbjct 160661 GAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGTAT 160701 >seq4 Length=1931745 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27036 GTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATA 27095 || ||| | || ||| | ||||| | ||||| || || || ||||| || || || Sbjct 933914 GTTGAATCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATT 933855 Query 27096 CCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT 27155 ||||| || || || | || || | ||| || ||||||||||| || | ||| | Sbjct 933854 CCACCAGACCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAGGATGGCAGAACCTTG 933795 Query 27156 TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||||||||||| || | || |||||| | | ||| | ||||| Sbjct 933794 TCTGACTACAACATTCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGG 933736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918361944640