Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 8e-28
seq3 134 3e-26
seq4 127 5e-24
>seq1
Length=2451740
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | ||||||||||||||| ||||||||||| || || | | ||| || ||
Sbjct 160687 TCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 160628
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| |||| ||||| || || ||||| | | ||||||||| || |||| || |||||
Sbjct 160627 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTT 160568
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || |||||||||||| |||||||| | || ||
Sbjct 160567 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 160508
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | ||||| || ||
Sbjct 160507 GGTCTTACCGGTCAAGGTCTTAACGAA 160481
Score = 122 bits (134), Expect = 2e-22
Identities = 365/558 (65%), Gaps = 14/558 (3%)
Strand=Plus/Minus
Query 139432 ATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTCT 139491
|||||||| | || | ||||| || || ||||| |||||||| |||||||| || ||
Sbjct 1146794 ATGTTGACGGATGAGTACGGTACTGCGTCGAACATCAAGTCGCGTGTCAACAGACTGTCG 1146735
Query 139492 GTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGACGTCCCAAAG 139551
|| ||| ||||||| || ||||| ||| | || || | | || |||
Sbjct 1146734 GTGCTTTCGGCGATCACGTCGACTCAGCAGAAGCTGAAGCTGTACACAAAGGTGCCACCA 1146675
Query 139552 AACGGACTTGTAATTTTTAGCGGAAGTGTTATGCTTCC---CGAAGGCAAGGAGAAAAAG 139608
||||| | || |||| | || || ||| | | |||||| |||||||| |||
Sbjct 1146674 AACGGGTTGGTGATTTACTGTGG---TGATATCATCACGGACGAAGGTAAGGAGAAGAAG 1146618
Query 139609 GTTG-CATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTTTACGCATGCGACAG 139667
| |||| || | || |||||| ||||||| | ||| | ||| || || |
Sbjct 1146617 CTGAACATT-GATTTCGAGCCTTTCAAGCCAATCAACACGAAGCTGTACCTGTGTGATAA 1146559
Query 139668 TGTTTTCCATACGGATTGTCTGAAAGATCTGTTGTA---TGATGACCAATCTTATGGTTT 139724
||||| || || || || ||| || | ||||||| | | | |||||
Sbjct 1146558 CAAGTTCCACACCGAGGCGCTCTCTGAGCTGCTGGAGGCTGATGACAACT---ACGGTTT 1146502
Query 139725 TATTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAAC 139784
|| ||| ||||||| |||||| | | |||| || || || | || | ||
Sbjct 1146501 CATCATCATGGATGGTTCCGGTTCTCTGTTTGGTTTGCTATCTGGTAACACCCGTACCGT 1146442
Query 139785 AATCTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCT 139844
||| | | ||| ||| |||||||||||||||||| | || || ||||||||| |
Sbjct 1146441 CATCACCAAGTTCACTGTTGACCTTCCAAAGAAGCACGGCCGTGGTGGTCAATCTGCTGT 1146382
Query 139845 GCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAA 139904
|||||| | |||||| || |||| ||||| |||||||| | ||||| ||||| |||
Sbjct 1146381 GCGTTTCGCAAGACTGAGAGAGGAGAAGAGACACAACTATGTTAGAAAGGTTGCTGAGGT 1146322
Query 139905 CGCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGG 139964
|| | || ||||| |||| | | ||| ||| ||| |||| | || ||
Sbjct 1146321 TGCCGTTCAATGTTTCATCACCAATGATAAGGTCAACGTTAACGGTCTTGTCCTTGCTGG 1146262
Query 139965 TTCCGCAGAGTTCAAGAC 139982
||| ||||| ||||||||
Sbjct 1146261 TTCTGCAGACTTCAAGAC 1146244
>seq3
Length=2123196
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | ||||||||||||||| ||||||||||| || || | | || || ||
Sbjct 1815525 TCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1815584
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| |||| ||||| || || ||||| | | ||||||||| || || | || || ||
Sbjct 1815585 ATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTT 1815644
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || ||||| || |||||||| ||| |||||||| | || ||
Sbjct 1815645 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCCAAGGTAAT 1815704
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || || || || || || | ||||| ||
Sbjct 1815705 GGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTT 1815743
>seq4
Length=1931745
Score = 127 bits (140), Expect = 5e-24
Identities = 130/170 (76%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | ||||||||||||||| ||||| ||||| || || | | ||| || ||
Sbjct 933747 TCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 933806
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| |||| || || || ||||| || | | ||| ||||| || |||| || |||||
Sbjct 933807 ATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTT 933866
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068
|||||||||||| || ||||| || |||||||||||| ||||||||
Sbjct 933867 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGATTCAACCT 933916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151896038555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |