Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6 221 1e-52 >seq6 Length=1261692 Score = 221 bits (244), Expect = 1e-52 Identities = 584/879 (66%), Gaps = 11/879 (1%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || || |||| ||| |||||||| || || || || | | Sbjct 58807 ACACCAGCCTTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGG 58748 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAG 4366 || || || |||||||| || || || || || ||||||| | || || || || Sbjct 58747 GAGATGTTCTCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTTGTTACCA-AG 58689 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATA-TACTGGCTCATGAGTTCGCAGTTAA 4425 || || ||||||| ||||| ||| | |||| || || | ||| | | ||||| | Sbjct 58688 TGCAACGAGCAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCA 58630 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 | || | | | | || || || | ||| || ||||| ||| || || |||| Sbjct 58629 TACCCAAGAGAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTT 58570 Query 4486 CTGTGATTATATCTTTTATTT-TATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 | ||||| || ||| | | | ||| | ||| || || |||| ||||||| Sbjct 58569 CGGTGATGAT-TCTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGGGCAAACAAC 58511 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| || ||||| || ||||||||||| | || ||||| |||||||| || || Sbjct 58510 AAACAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTC 58451 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||| ||||||||||| || | |||||| || | ||| ||||| || || ||| Sbjct 58450 AAACCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAG 58391 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| || || ||||| || || | || | || | | | | || Sbjct 58390 AAGATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCG 58331 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 ||||||| | || ||||| | ||| || ||||| | || || || || | || ||| Sbjct 58330 GCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCG 58271 Query 4785 TTAAATAATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || || || ||| || |||||| | || || ||||| || | | | || Sbjct 58270 TTGAACAA-GAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTA 58212 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 | ||||| || || || || || ||||| || || || ||||| |||| |||| Sbjct 58211 AGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGG 58152 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | |||||| || | | || |||| || ||||| ||||| || ||||||||| || Sbjct 58151 GATTTGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGC 58092 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG-TCAGGCTTAA--GTTTTTT 5020 |||||||| |||| || || || ||| | | ||| || | | || || || Sbjct 58091 GGCAAAAAAGGCCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATCTGTTGTT 58032 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||||| | ||||||| || | |||||||| || || ||||||| || || || || || Sbjct 58031 CCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGC 57972 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGG 5119 || || ||| |||||| ||| | |||| ||| || Sbjct 57971 CTTCTTATACGCTTGCCAAATCTCATGGTACTTAATAGG 57933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049563567331