Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq5 264 2e-65
seq4 167 3e-36
>seq5
Length=1517892
Score = 264 bits (292), Expect = 2e-65
Identities = 1323/2085 (63%), Gaps = 63/2085 (3%)
Strand=Plus/Minus
Query 76775 ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGT 76834
||| | ||| || ||||| | || |||||||| || ||| | | ||||||||||| ||
Sbjct 776977 ATCGACTGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGT 776918
Query 76835 TTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATC 76894
|| | ||| |||| |||||||| ||||| || ||||| | | | | |
Sbjct 776917 CTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTT-----ACCCATGGTT 776863
Query 76895 GG----CT-ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949
|| || |||||||| |||| || ||| ||| |||||| |||| | | ||| ||
Sbjct 776862 GGGGCTCTGATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCA 776803
Query 76950 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 77009
||||| | || ||||||||||||| |||||||| | || ||| | | | || |
Sbjct 776802 GCCATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAAT 776743
Query 77010 TCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTT 77066
| | ||||| ||||| ||||| |||||||| || ||||| || |||||
Sbjct 776742 TGCTTTGGAATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTC 776683
Query 77067 ATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATT 77126
|| | |||| ||| | | || ||| | | || | | || || || ||
Sbjct 776682 ATTGCGTCATCCCAGATACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATC 776623
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
|| ||||| || | | || | ||||| ||| |||||| || ||||| || | | ||
Sbjct 776622 TGGAATTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACAT 776563
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
|| |||| ||||| ||||||| ||||| ||||||||||| ||||| ||||| | |
Sbjct 776562 TCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAG 776503
Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306
||||| | ||||| | || | | |||| | | | ||||||||| | || |
Sbjct 776502 TTTCTCATACCATACTTGGAAATGTCAGCTTTCAATGAGTCCCAATCCCACAAGTCAGTT 776443
Query 77307 GG--TACAACATCCCAAAGATCGTATTGTAGAATT--CCGTTACTAGCATATGATCCATT 77362
|| ||| || |||| || || |||| | ||| || | | ||| || ||
Sbjct 776442 GGCTTACGAC--CCCAGAGGTCAAATTGCA--ATTGGCCCTGAGAAGCTGGAGAGCCTGG 776387
Query 77363 ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422
| | ||| || | ||||| | || ||| | ||| | || || | || ||||
Sbjct 776386 GAAGGATTCGTAGGCACCTTCAGCTTGAGCCAACTCAACAGAGGCCTCGACAGCACCGTG 776327
Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA 77482
|| || ||||| || || | | || | |||| || || | ||||| ||
Sbjct 776326 GTAGATAGTTTCAAAGATTTGGATGTTCAACTCTTTAGCAGCATCAGACTCAAAAGGCAT 776267
Query 77483 ATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCT 77542
| |||| | || |||||||| || | || || || |||| |||| ||||| | |||
Sbjct 776266 ACGTAACATCATGAAGGCATCCGCAAGGCCTTGGACACCAAGGGCAATTGGTCTGTTTCT 776207
Query 77543 CTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAG 77602
| | || ||| ||||||||||| || || ||||| |||| || ||| | || |
Sbjct 776206 CATGTTAGAAGCACGAGCTTCTGGAACTGGGTAGTAATTTCTGTCGATGATTCTGTTCAA 776147
Query 77603 ATTTCTAACAACTACTTTAACCACGTC------CTTT----AGTT-TAAGAA--AATCAA 77649
|| | || || || | | || |||| |||| |||| | ||||
Sbjct 776146 GTTCTTTGTAAGCACCTTGGCAATATCGTGCAACTTTTGGAAGTTATAAGTTTGAGTCAA 776087
Query 77650 ATCTTCCATCTA--TAACAAACAT-GTTCAAAG--CTATAGATGCTAGATTACAAACTGC 77704
| | || | | | | ||| | | | ||| | || ||||| | |||||||| ||
Sbjct 776086 ACCATCAACCGACTTCTCAATGAAAGCTGGAAGGGCAATGGATGCCAAGTTACAAACAGC 776027
Query 77705 TACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGT 77764
||||| | | | || | | ||||| ||| | || | | ||||| |
Sbjct 776026 AACCTCGTCTGGAGAAGAGTACTCGACAATCTCACAACACAAGTTCGAAGACTTGATGAT 775967
Query 77765 GCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGT 77824
|||| || | || ||| |||||| || || | || |||||||| || || || ||
Sbjct 775966 ACCCAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGT 775907
Query 77825 CCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGA 77884
|| |||||| |||||| || | || | | ||||| | ||| || || ||
Sbjct 775906 ACCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCAGAGCTTTTGAGCCTT---CACAGT 775850
Query 77885 TTTGTATCG----CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCC 77940
|| || ||| ||| ||| || | ||||| | |||||||||||| ||
Sbjct 775849 CTTTCTTCCTTTACCT-TCTTGTTCGTACTTTGTATACAATGCTTCAAATTCATCACCAT 775791
Query 77941 AAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCT 78000
| ||||| |||| |||| |||||||| | | || | ||| ||||| | | |
Sbjct 775790 ATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTT 775731
Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060
||| || ||||| || ||||| || ||||| | || || | ||| || | |||
Sbjct 775730 CAACACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACAAATCACGAGCTCTGA 775671
Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120
||||| || || |||||| | | ||||| || || | ||||| | |||||||
Sbjct 775670 TCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAGATATCCGCGTGCCATG 775611
Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180
| || | || | || | | || |||| || ||||| || || || | ||||| |
Sbjct 775610 GCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTTG 775551
Query 78181 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAG 78240
| ||||||||| | || | | ||| ||||| | ||| ||||| || || || || ||||
Sbjct 775550 CAGTGTTATTAAAGACACGGACCATAGGAATCAAACCATTAGAGGTACCGTTGGTACCAG 775491
Query 78241 AAATAT---AACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCA 78297
|| | | | | |||| | ||||| |||| | || || || || ||
Sbjct 775490 CGATGTAGGACCCTGTACTT---CTGATATTGTGAATGTGCAAACCGATACCACCAGCGG 775434
Query 78298 TCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCA 78357
||||||| || | || || | ||||| || ||||||||||| || || ||| |||
Sbjct 775433 TCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCT 775374
Query 78358 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATG 78417
|||| || || ||||| ||||| || | ||| || ||||| || || |
Sbjct 775373 TCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAG 775314
Query 78418 TCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATT 78477
| ||||| || || || || | |||||| | || ||||| |||||||| | || |
Sbjct 775313 TTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACT 775254
Query 78478 CTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537
|| || | || || || | || |||||||||| || ||||| || | ||
Sbjct 775253 TCATATCTCTACCGTGGATACCGATGGCCACACGCATCACCAAGTGCTGTGGACGCTCGG 775194
Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597
| || || | | | | |||||| ||| | ||||| || || |||||||| ||||
Sbjct 775193 CAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAATGTCTTGAAACCAAAGTAGT 775134
Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTA--TTTGGT 78655
|||| |||||||| ||||| | ||| |||| || | | ||| ||| | ||||
Sbjct 775133 TGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAACTCATCCTTGAACTCTTGG- 775075
Query 78656 AACAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCAT--TTTTAGGATT 78712
||||||| ||| | | || || | || || | ||| || | | || || ||
Sbjct 775074 -ACAATAT-CATAAGTCTCCTTAGACACCATTGGCG--CGTGCAAATTGGTCTTTGGGTT 775019
Query 78713 AACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAG 78772
| |||||| | || ||||| || ||| | || ||| | || | |||| |||||| |
Sbjct 775018 GATATAGTTGTACAACTCTTCAATCACAACGCTGAATTGCTTCGTGGTTTGCTTGTGCAA 774959
Query 78773 ATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817
|| || | || ||||| ||||| || ||||||| || || ||
Sbjct 774958 GTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGTCCGGGTG 774914
>seq4
Length=1931745
Score = 167 bits (184), Expect = 3e-36
Identities = 955/1510 (63%), Gaps = 40/1510 (3%)
Strand=Plus/Minus
Query 77118 TTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGT 77177
||||| | ||| || || ||||| | ||| || |||||||| ||||| || |||
Sbjct 970300 TTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTATATATTCGAAGTTATTGGC 970241
Query 77178 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACC 77237
|| | | |||||| ||||| || || | || || || || ||||| ||| |||||
Sbjct 970240 TCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGCTGTAGGCATTGGTCCCACC 970181
Query 77238 AATAAACTATTTCTGAGACCAT-GTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296
|||||| || || || |||| | ||| | || | |||||| | | | |||||| |
Sbjct 970180 AATAAAGAGTTCCTTAGTCCATAGCGTTTT-ATATCATCTTTCATCAAGTCCCAATCGTA 970122
Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356
| | ||||| | || ||| | |||| |||| | ||| || || ||| |||
Sbjct 970121 CATGTTCGAAGGGTTATGATTCCACATATCGAATTGCAAAATCCCCTTTGAAGCTGGTGA 970062
Query 77357 TCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATG 77415
|| | ||| | | ||| ||||| | || ||| ||| || || |||||||| |
Sbjct 970061 CCCTTCATAACTCTTATAGGGTCCATACTCTTT-AGCGAGCTCTATTGAGGCTTCCAAGG 970003
Query 77416 CTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAA 77475
| ||| ||| || ||||| || || || |||| | | || || || ||||
Sbjct 970002 CAGCGTGATATATAGTTTCAAAGATGTTGATATTCAACTTTTTAGCGTCTTCGGACTCAA 969943
Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535
| || || |||| || || ||||||||| || || || ||||| | || ||||
Sbjct 969942 AGGGCAAACGTAACTCCATGAACAGATCTGCTAAACCTTGCACCCCAATTGCCATTGGTC 969883
Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATT--AATGTCTATAAT 77593
||| | || |||| | || || || | || || ||| || || || |
Sbjct 969882 TATTTTTCAAATTGCTGGTCTTTGCCTCCTCCAAGGGGTAC--ATTCCAACATCAATGAC 969825
Query 77594 TTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT------- 77646
||| || | ||| || || ||||| || || || | || || | |||
Sbjct 969824 TTTGTTTAAATTCCTCGTAATCACTTTGACAACCTCGTGGAGCTTGCTATAATTCATCCA 969765
Query 77647 CAAATCTTC--CATCTATAACAA-ACATGTT--CAAAGCTATAGATGCTAGATTACAAAC 77701
|| | ||| || || | ||| | ||| |||||| | || ||||||||||||||
Sbjct 969764 CACAGATTCATCAACTGTCTCAACAAATGACGGCAAAGCCACGGAAGCTAGATTACAAAC 969705
Query 77702 TGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGAT 77761
|| | || | || ||| || | || || ||||| || | |||||||
Sbjct 969704 AGCAATTTCTTCTGCAGAACTATACTGAACAATTTCACAGCATAGGTTTGAAGATTTGAT 969645
Query 77762 AGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGG 77821
|| |||| |||| |||||||||||| || || || | |||||||||||| || || ||
Sbjct 969644 TGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTTACAAGCGTCCTTATAAAGCATGAATGG 969585
Query 77822 AGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTA--- 77877
|| ||||| | || || | ||| | ||||||| | |||| ||||| |
Sbjct 969584 CCCACCAGTTTCCACTTGGCTCTCTAAAATGGCGTTCCAGA-GCCTCTGTGCTTTGACTG 969526
Query 77878 ---TCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCAT 77934
|||||| | |||| ||| | || | ||| | || | || ||||
Sbjct 969525 TTTTCATAGC-----AAGGCCTTCCTCGGTG-TACTTCTCATACAACCTCTTGAAGTCAT 969472
Query 77935 CTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCAT 77994
|||| | |||| | ||| | || || | | | ||| || |||
Sbjct 969471 CTCCATACGTCTCATTGAGTCCTCTTGCCTGATCAGGAGAGAAGAGATTCCATTCTTCAT 969412
Query 77995 CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 78054
|| | ||| || |||||| |||||||||||||| | ||| || ||||||| |
Sbjct 969411 TATCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGCATAGAACAGATCTCTTG 969352
Query 78055 TTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAAT 78114
|| |||| || || || ||||| |||||| || ||||| | | ||||| ||
Sbjct 969351 CTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACATCAGCAT 969292
Query 78115 GCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATAT 78174
|||||||||| | |||||||| | | || || | ||||| || || ||||| | ||
Sbjct 969291 GCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGATCCACAT 969232
Query 78175 ATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTG 78234
| ||||| || || ||| | |||||||||||||||| || || || || || |||||||
Sbjct 969231 ACCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTCCATTGGAAGTGCCATTTG 969172
Query 78235 TTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTG 78294
| |||| ||||| ||| || | ||||| | |||||| | || || |
Sbjct 969171 TACCAGCGATATAGGATCCCTGGGCCCTTATATTTGAGGCGTGTATCCCCAAGCCACCAG 969112
Query 78295 CCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCAT 78354
| ||| || || || || || | || | | ||| || || ||||| ||| |
Sbjct 969111 CAGCCTTCGAAATGAGTGCACATTTATGTAAGGATTTGTATATCCCATCTATTGAGTCGT 969052
Query 78355 CCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG--ATGAACAGTTCCTGCATTAAA 78412
|||| || || || || || |||| ||| ||| ||||||| || ||
Sbjct 969051 CCATTATCCCCAGGAGGAAGCACGAGGACA-AGAATGGCATG-GGTGTTCCTGAGTTGAA 968994
Query 78413 TAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGC 78472
|| |||||||| || || ||||| | | | || | | | || || | | |||
Sbjct 968993 CAACGTCGGAGACGCGTGTGTAAATAACCTCTGGGACATCATGTCATAGGTCTGGACAGC 968934
Query 78473 TGATTCTATGTCCCATTGATGAATTCCTACCGCT-ACACGCATCAACATATGCTGAGGTC 78531
|| ||||||||| ||| || || | ||| |||||||| |||||| |||||||
Sbjct 968933 AGACTCTATGTCCTTACCATGTATCCCCA-AGCTGACACGCATAAACATAAACTGAGGTG 968875
Query 78532 TTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 78591
||||| | || || | |||| || ||||| |||| |||||| | | | |||
Sbjct 968874 TTTCAGCTATCAACGCATCAACCTTCAGGAAATATGACTTTTGCAAAGTCATGATAGCAA 968815
Query 78592 AATAGTTGTA 78601
| ||||||||
Sbjct 968814 AGTAGTTGTA 968805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668739216480
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