Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 152 1e-31 seq3 129 1e-24 seq4 113 9e-20 seq6 102 2e-16 >seq1 Length=2451740 Score = 152 bits (168), Expect = 1e-31 Identities = 145/183 (79%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||||||||||||||||| |||| || | ||||||||| | ||| || || ||||| Sbjct 160662 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCCTCCAATTGCTTACCAGCAAA 160604 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||||||||||||||||||||| | || || | Sbjct 160603 GATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATT 160544 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | || || || | || || |||||||| ||||| |||||||| Sbjct 160543 GTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAAC 160484 Query 283088 GAA 283090 ||| Sbjct 160483 GAA 160481 >seq3 Length=2123196 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||||| | || | |||||||| | ||| || ||||||||| Sbjct 1815550 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAG 1815609 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||||||| || |||||||| ||||| |||||||| | || ||| | Sbjct 1815610 ATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTG 1815669 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | || || || | || || |||||||| || | || || ||| Sbjct 1815670 TCAATGGTGTCGGAGGACTCAACCTCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACG 1815729 Query 283089 AATATCTGCATTTT 283102 || || ||||| || Sbjct 1815730 AAAATTTGCATCTT 1815743 >seq4 Length=1931745 Score = 113 bits (124), Expect = 9e-20 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | ||| |||| || | ||| || ||||| ||||||||||||| Sbjct 933735 ACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 933794 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||||||||| | |||||| || || || ||||| | ||| ||||| | Sbjct 933795 CAAG-GTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTG 933853 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||||| |||||||| | || ||| | || || ||||| || | ||| | Sbjct 933854 GAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGATTCAA 933913 Query 283051 C 283051 | Sbjct 933914 C 933914 >seq6 Length=1261692 Score = 102 bits (112), Expect = 2e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | |||||||| | || || ||||||| || ||||| |||||| Sbjct 168283 GTTGGGAAACCCTCAACTTGACCGTTAGCGATAGCTCTCATCAAGGTGGACTTACCAGCA 168224 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || || | |||||| | | || ||||| ||| |||| |||||| Sbjct 168223 CCGTTTGGACCACACAAACCATATCTTCTACCACGCTTCAATCTAAGTTGGGTCTTGTTC 168164 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | | |||||| ||||||| |||| ||||||||||| | ||||| |||||| || Sbjct 168163 AACAAGATCTTAGCACCATAAGCCAAGGAGAACTCACAGTTACACAAGTCCTCACC 168108 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| |||||||||||||| || |||| || ||||||| ||||||||| ||||||||| Sbjct 976586 GGGAATCCTTCCAACTGACCATTGGCAATGGCTCTCATCAATGTCGACTTACCAGCACCA 976645 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTC 317121 || | || || ||||| || | || ||| ||| Sbjct 976646 TTACGTCCACATAGACCGTATCTATGTCCTTTC 976678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739106120578