Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 1e-31
seq3 129 1e-24
seq4 113 9e-20
seq6 102 2e-16
>seq1
Length=2451740
Score = 152 bits (168), Expect = 1e-31
Identities = 145/183 (79%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
|| ||||||||||||||||||| |||| || | ||||||||| | ||| || || |||||
Sbjct 160662 TCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCCTCCAATTGCTTACCAGCAAA 160604
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||||||||||||||||||||| | || || |
Sbjct 160603 GATCAATCTTTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATT 160544
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | || || || | || || |||||||| ||||| ||||||||
Sbjct 160543 GTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAAC 160484
Query 283088 GAA 283090
|||
Sbjct 160483 GAA 160481
>seq3
Length=2123196
Score = 129 bits (142), Expect = 1e-24
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||||||||||| | || | |||||||| | ||| || |||||||||
Sbjct 1815550 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAG 1815609
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | ||||||||| || |||||||| ||||| |||||||| | || ||| |
Sbjct 1815610 ATCAATCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTG 1815669
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | || || |||||||| || | || || |||
Sbjct 1815670 TCAATGGTGTCGGAGGACTCAACCTCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACG 1815729
Query 283089 AATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 1815730 AAAATTTGCATCTT 1815743
>seq4
Length=1931745
Score = 113 bits (124), Expect = 9e-20
Identities = 135/181 (75%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
|||||| | || | ||| |||| || | ||| || ||||| |||||||||||||
Sbjct 933735 ACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 933794
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || | ||||||||| | |||||| || || || ||||| | ||| ||||| |
Sbjct 933795 CAAG-GTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTG 933853
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||||||||||||| |||||||| | || ||| | || || ||||| || | ||| |
Sbjct 933854 GAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGATTCAA 933913
Query 283051 C 283051
|
Sbjct 933914 C 933914
>seq6
Length=1261692
Score = 102 bits (112), Expect = 2e-16
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | |||||||| | || || ||||||| || ||||| ||||||
Sbjct 168283 GTTGGGAAACCCTCAACTTGACCGTTAGCGATAGCTCTCATCAAGGTGGACTTACCAGCA 168224
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || | |||||| | | || ||||| ||| |||| ||||||
Sbjct 168223 CCGTTTGGACCACACAAACCATATCTTCTACCACGCTTCAATCTAAGTTGGGTCTTGTTC 168164
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | |||||| ||||||| |||| ||||||||||| | ||||| |||||| ||
Sbjct 168163 AACAAGATCTTAGCACCATAAGCCAAGGAGAACTCACAGTTACACAAGTCCTCACC 168108
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| |||||||||||||| || |||| || ||||||| ||||||||| |||||||||
Sbjct 976586 GGGAATCCTTCCAACTGACCATTGGCAATGGCTCTCATCAATGTCGACTTACCAGCACCA 976645
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTC 317121
|| | || || ||||| || | || ||| |||
Sbjct 976646 TTACGTCCACATAGACCGTATCTATGTCCTTTC 976678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739106120578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |