Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 4e-25
seq1 122 6e-23
>seq3
Length=2123196
Score = 129 bits (142), Expect = 4e-25
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||| | |||| |||||| ||| |||||||||||||||||| || |
Sbjct 1815514 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1815573
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| |||||||||||||| | || || |||| |
Sbjct 1815574 AAAGTT--CTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTG 1815631
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | ||| || || ||| ||||| ||| | | | |||||||||| ||| || |
Sbjct 1815632 GGATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAA 1815691
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| ||||| ||||| || || ||||| || ||||| ||||||||
Sbjct 1815692 CCTCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCAT 1815740
>seq1
Length=2451740
Score = 122 bits (134), Expect = 6e-23
Identities = 175/240 (73%), Gaps = 9/240 (4%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| ||| | |||| |||||| ||| |||||||||||||||||| ||
Sbjct 160701 ATACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCA 160642
Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | || | || | || |||| ||||| || ||||||||||| | || || ||||
Sbjct 160641 GACAAGGTTCTGC-CATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 160583
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | ||| ||||| || ||||| ||| || ||| | |||||||| | |||
Sbjct 160582 TGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAGGAC 160525
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG--ATTTGCATGATGT 44342
|| ||||||| ||||| ||||| || || | |||||| |||||| || || |||||||
Sbjct 160524 TCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAGCTATATG-ATGATGT 160466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990369288319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |