Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 113 1e-19 >seq2 Length=194962 Score = 113 bits (124), Expect = 1e-19 Identities = 181/255 (71%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 230385 AATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCG 230444 ||| || || ||||||||| | |||||||| || | ||||||| | ||| || Sbjct 12939 AATTATCACTGAAGCAGTTACTATTGAAAAGGAATTTTTCATTGACGCTTTACCAA-TCT 12997 Query 230445 CCTTATT-GGCATGAACGCTGAACTTA-TGGGACAGTACATCGAATTCGTAGCCGACCGC 230502 | ||||| || |||||| | |||||| || | || ||| | |||||||| || || | Sbjct 12998 CATTATTAGGTATGAACTGT-AACTTAATGTGTCAATACGTTGAATTCGTTGCTGATAGA 13056 Query 230503 ATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATG 230562 | || ||||| | ||| || | ||||| |||||| || ||||| || | |||||| Sbjct 13057 TTATTGGTTGCCTTAGGTAACAAAAAAGTTTACAACGTTACCAACCCATTCGACTTTATG 13116 Query 230563 GAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG 230622 || |||||| | || |||||||| |||||||||||| | || |||||||| || Sbjct 13117 GAAAACATTTCCTTAGCCGGAAAGACCAATTTCTTCGAAAAGAGAGTTAGTGACTACCAA 13176 Query 230623 AGGCCTGGTGTGATG 230637 | | | ||||| ||| Sbjct 13177 AAGGCCGGTGTCATG 13191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816681180200