Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 168 7e-37 >seq2 Length=194962 Score = 168 bits (186), Expect = 7e-37 Identities = 572/879 (65%), Gaps = 13/879 (1%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| || ||||| | |||||||| || || || || || ||| || || || | Sbjct 13177 TTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTTT 13118 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| || || || || || ||| | || ||| |||| | |||| || | | | Sbjct 13117 CCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGT-TACCTAAGG-CAACCAA 13060 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAA 16850 ||||||||| || || ||||| | ||||| |||||||| | |||||||| |||| ||| Sbjct 13059 TAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAA 13000 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910 | | || | ||| || | |||||| | || ||| ||| ||||| | |||| Sbjct 12999 TGAG-ATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAA 12941 Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTATGTT-TAAGATGTTTAAACATCAGACATGCG 16969 | || |||| | | ||| | | || |||| || || | || ||||||| Sbjct 12940 TTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAG-TGGGAGAATAACAAACATGCG 12882 Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029 ||||| ||||| || || || | | ||| | ||| || || || || || || ||| Sbjct 12881 AAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGC 12822 Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089 || |||| ||||||||||| || || | || || || ||| ||||| ||||| Sbjct 12821 ATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCT 12762 Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149 || || | || || || | ||||| ||| || | || || | | || |||||| Sbjct 12761 TCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCAT 12702 Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAAT 17209 | |||| || || || | ||| || ||| || | || || || || ||||| Sbjct 12701 CTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAG 12642 Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 || ||||| | | || | || || || ||||| |||| ||| |||| ||| Sbjct 12641 AAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTCAGAG 12582 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329 || ||||| ||||| || || || || || || || |||||| | ||||||||| Sbjct 12581 TGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAACT 12522 Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAAC 17389 || | |||| ||| | | |||||||| || || ||||| || || || || Sbjct 12521 TCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGAAT 12462 Query 17390 GCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGT--AA--GAACGCGCCAGTCCTT 17445 ||||| || |||||| ||| |||||| | ||| || || |||||| | Sbjct 12461 GCCAAGATTCTGGAAATGAAGTATCTTTCGT-TGTTGTTCAATTTTTCGTTCCAGTCATG 12403 Query 17446 TAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATA 17505 |||||| | ||| | |||||||| ||||| || ||| | ||||| || || Sbjct 12402 GGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGTA 12343 Query 17506 CATATTCCAAATATCATTGTATTGTATGGGGAATACAAC 17544 ||| | ||| || || | ||| | || ||||||| ||| Sbjct 12342 CATTTGCCAGATTTCGTGGTACTTGATTGGGAATAAAAC 12304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542106567200