Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 196 5e-45 >seq2 Length=194962 Score = 196 bits (216), Expect = 5e-45 Identities = 576/877 (66%), Gaps = 22/877 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||| |||||||| | ||||||||||| || || ||||| |||| || || |||| Sbjct 13177 TTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTTT 13118 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||| || || || || ||| | || ||| | || | |||| || | ||| Sbjct 13117 CCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGT-TACCTAAG----GCAAC 13063 Query 16030 ---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086 ||||||||| || || ||||| | |||||||||||||||| || || || |||| Sbjct 13062 CAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAA 13003 Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146 | | | || | ||| | | ||||||| | ||| || ||| ||||| | || Sbjct 13002 TAATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGAT 12943 Query 16147 GATATCGGTGGCTCGTGTTTCAGACGGTG-TATGGTTT--AGGTGTTTAAACATTAGACA 16203 || || | | | ||| || | || ||| | ||| || | | ||| Sbjct 12942 AAT-TCTTT--CAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACA 12886 Query 16204 CGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCC 16263 ||||| || |||| ||||| || | | ||| | ||| ||||| || ||||| || Sbjct 12885 TGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACC 12826 Query 16264 TGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATAT 16323 |||||| |||| |||||||||||||| || | ||||||||| || ||||| || Sbjct 12825 AGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGAT 12766 Query 16324 ACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAAT 16383 ||| ||||||| || || || | ||||| ||| || | |||||| | || || || Sbjct 12765 ACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGAT 12706 Query 16384 CCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAA 16443 |||| | |||| || || || | || |||||| || | || || || || || Sbjct 12705 CCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAA 12646 Query 16444 CAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTC 16503 || || ||||| ||| | || || || || || ||||| ||| |||| Sbjct 12645 TAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTC 12586 Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563 ||||| ||||| || || || || || |||||||| || || || | ||||| Sbjct 12585 AGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTG 12526 Query 16564 TACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAA 16623 ||||| | | || ||| ||| ||| || || || ||||||||| |||||||| Sbjct 12525 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAA 12466 Query 16624 AAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT----ATGCCAAT 16679 || ||||| || |||||| ||| |||||| | ||| | | | ||| | Sbjct 12465 GAATGCCAAGATTCTGGAAATGAAGTATCTTTCGT-TGTTGTTCAATTTTTCGTTCCAGT 12407 Query 16680 CTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTT 16739 | | |||||| | ||| | |||||| | ||||| ||| ||| | ||||| | Sbjct 12406 CATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 12347 Query 16740 TATACATTTTCCAAATATCATTGTA-TTGTATGGGAA 16775 | ||||||| ||| || || | ||| ||| |||||| Sbjct 12346 TGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAA 12310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410947952800