Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2 260 1e-64
>seq2
Length=194962
Score = 260 bits (288), Expect = 1e-64
Identities = 585/865 (68%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||||||||||||||||| |||||||| || ||||| |||| ||||| |||
Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060
|||||||| || || || || | ||| | ||| ||| | | || || | | |
Sbjct 13118 TCCATAAAGTCGAATGGGTTGGT--AACGTT-GTAAACTTTTTTGTTACCTAAGGCAACC 13062
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
||||||||||| || || ||||| | || || |||||| | ||||||||| |||| |
Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
||| | || | || || | ||||| | ||||| ||| |||| |||||| ||||
Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942
Query 16181 ATATCTCTTACTACACTATTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237
|| |||| | ||| || | | || |||| |||||| || | | |||
Sbjct 12941 AT---TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACAT 12885
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
|| |||||| || || ||||| || | || ||||| || || || || || | |||
Sbjct 12884 GCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCA 12825
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||||| |||| || || | ||| || || | |||||||||||| ||||| |||
Sbjct 12824 GGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATA 12765
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct-at 16416
|||||||| || || || ||||| |||| |||||| | || | | | || ||
Sbjct 12764 CCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCA-TCACTGAT 12706
Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
|||| || |||||| | || || | || | ||| ||||| || || ||||| ||
Sbjct 12705 CCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAA 12646
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
||| | | ||| || ||| || || || || || ||||| || ||||
Sbjct 12645 TAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTC 12586
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|| || || || ||||| || || |||||||| || || | ||||| | |||||
Sbjct 12585 AGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTG 12526
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| | || |||| | |||||||||||||| || || || ||| |||||
Sbjct 12525 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAA 12466
Query 16657 AAACG-CAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTT--AACCAGT 16712
|| | |||| | || ||| || | | ||||||| | | || |||| |||||
Sbjct 12465 GAATGCCAAGATTCTG-GAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGT 12407
Query 16713 CAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTT 16772
|| |||||| ||||| | ||||| ||||||| || ||||| ||||||| |
Sbjct 12406 CATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 12347
Query 16773 TATACATTTTCCATATGTCTTCGTA 16797
| ||||||| ||| || || | |||
Sbjct 12346 TGTACATTTGCCAGATTTCGTGGTA 12322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462508878044000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |