Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2 260 1e-64 >seq2 Length=194962 Score = 260 bits (288), Expect = 1e-64 Identities = 585/865 (68%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||||||||||||||||| |||||||| || ||||| |||| ||||| ||| Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060 |||||||| || || || || | ||| | ||| ||| | | || || | | | Sbjct 13118 TCCATAAAGTCGAATGGGTTGGT--AACGTT-GTAAACTTTTTTGTTACCTAAGGCAACC 13062 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 ||||||||||| || || ||||| | || || |||||| | ||||||||| |||| | Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 ||| | || | || || | ||||| | ||||| ||| |||| |||||| |||| Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942 Query 16181 ATATCTCTTACTACACTATTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237 || |||| | ||| || | | || |||| |||||| || | | ||| Sbjct 12941 AT---TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACAT 12885 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 || |||||| || || ||||| || | || ||||| || || || || || | ||| Sbjct 12884 GCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCA 12825 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||||| |||| || || | ||| || || | |||||||||||| ||||| ||| Sbjct 12824 GGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATA 12765 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct-at 16416 |||||||| || || || ||||| |||| |||||| | || | | | || || Sbjct 12764 CCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCA-TCACTGAT 12706 Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476 |||| || |||||| | || || | || | ||| ||||| || || ||||| || Sbjct 12705 CCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAA 12646 Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536 ||| | | ||| || ||| || || || || || ||||| || |||| Sbjct 12645 TAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTC 12586 Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596 || || || || ||||| || || |||||||| || || | ||||| | ||||| Sbjct 12585 AGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTG 12526 Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656 ||||||| | || |||| | |||||||||||||| || || || ||| ||||| Sbjct 12525 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAA 12466 Query 16657 AAACG-CAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTT--AACCAGT 16712 || | |||| | || ||| || | | ||||||| | | || |||| ||||| Sbjct 12465 GAATGCCAAGATTCTG-GAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGT 12407 Query 16713 CAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTT 16772 || |||||| ||||| | ||||| ||||||| || ||||| ||||||| | Sbjct 12406 CATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 12347 Query 16773 TATACATTTTCCATATGTCTTCGTA 16797 | ||||||| ||| || || | ||| Sbjct 12346 TGTACATTTGCCAGATTTCGTGGTA 12322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462508878044000