Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2 248 8e-61 >seq2 Length=194962 Score = 248 bits (274), Expect = 8e-61 Identities = 573/856 (67%), Gaps = 13/856 (2%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||||||||||| ||||| ||||| || || || || | | || || ||| Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032 |||||||| || ||||| || || | | ||||| | ||||| | | | | Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTACCTAAGGCAACCAAT 13059 Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092 |||||||| |||| ||| |||| |||||| ||||||| | ||| |||||||||| || | Sbjct 13058 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 12999 Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152 | || | | | |||||||| ||||| |||| || || || | ||||| Sbjct 12998 GAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAATT 12939 Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212 | || ||| || | || | || || || || | ||||| || ||| Sbjct 12938 CTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACATGCGAAA 12879 Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272 ||| || | || ||||| | || || | ||| || || || ||||| || ||||| Sbjct 12878 TCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCATT 12819 Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332 || |||| || |||||||| || || | ||| ||||| || ||||| || || ||| Sbjct 12818 AAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTTCA 12759 Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392 || ||||| || || | ||||| ||| || || | || | | | |||||| || Sbjct 12758 ACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATCTT 12699 Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452 |||||| |||| || || || ||| || || | || |||||||| ||||| Sbjct 12698 AAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGAAG 12639 Query 14453 TC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14509 || |||| |||| | | ||||| |||| || || |||||||| || |||||||| Sbjct 12638 TCAGCTTC-CTTTGGATCCTTGA--TGTAGGTGTCGATAAGTAACGAGTAGGTTTCAGAG 12582 Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569 || ||||||||||| || || |||||||| ||||| | ||||||| ||| || Sbjct 12581 TGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAACT 12522 Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629 || | | || |||| |||| ||||| ||||| ||||| ||| ||| ||||| ||| Sbjct 12521 TCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGAAT 12462 Query 14630 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTT---TTCCAATC--GG 14684 ||||| || | ||| |||||| || | ||| | | |||| ||||| || || Sbjct 12461 GCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCATGG 12402 Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744 | ||| ||| | ||| | ||| || | ||||| || ||| |||| || || | Sbjct 12401 GT--ATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGT 12344 Query 14745 ACATTACCCATATTTC 14760 ||||| ||| ||||| Sbjct 12343 ACATTTGCCAGATTTC 12328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482342344167200