Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 248 8e-61
>seq2
Length=194962
Score = 248 bits (274), Expect = 8e-61
Identities = 573/856 (67%), Gaps = 13/856 (2%)
Strand=Plus/Minus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||||||||||| ||||| ||||| || || || || | | || || |||
Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032
|||||||| || ||||| || || | | ||||| | ||||| | | | |
Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTACCTAAGGCAACCAAT 13059
Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092
|||||||| |||| ||| |||| |||||| ||||||| | ||| |||||||||| || |
Sbjct 13058 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 12999
Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152
| || | | | |||||||| ||||| |||| || || || | |||||
Sbjct 12998 GAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAATT 12939
Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212
| || ||| || | || | || || || || | ||||| || |||
Sbjct 12938 CTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACATGCGAAA 12879
Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272
||| || | || ||||| | || || | ||| || || || ||||| || |||||
Sbjct 12878 TCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCATT 12819
Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332
|| |||| || |||||||| || || | ||| ||||| || ||||| || || |||
Sbjct 12818 AAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTTCA 12759
Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392
|| ||||| || || | ||||| ||| || || | || | | | |||||| ||
Sbjct 12758 ACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATCTT 12699
Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452
|||||| |||| || || || ||| || || | || |||||||| |||||
Sbjct 12698 AAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGAAG 12639
Query 14453 TC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 14509
|| |||| |||| | | ||||| |||| || || |||||||| || ||||||||
Sbjct 12638 TCAGCTTC-CTTTGGATCCTTGA--TGTAGGTGTCGATAAGTAACGAGTAGGTTTCAGAG 12582
Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569
|| ||||||||||| || || |||||||| ||||| | ||||||| ||| ||
Sbjct 12581 TGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAACT 12522
Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629
|| | | || |||| |||| ||||| ||||| ||||| ||| ||| ||||| |||
Sbjct 12521 TCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGAAT 12462
Query 14630 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTT---TTCCAATC--GG 14684
||||| || | ||| |||||| || | ||| | | |||| ||||| || ||
Sbjct 12461 GCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCATGG 12402
Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744
| ||| ||| | ||| | ||| || | ||||| || ||| |||| || || |
Sbjct 12401 GT--ATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGT 12344
Query 14745 ACATTACCCATATTTC 14760
||||| ||| |||||
Sbjct 12343 ACATTTGCCAGATTTC 12328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482342344167200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |