Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 174 1e-38 seq32 87.8 2e-12 >seq2 Length=194962 Score = 174 bits (192), Expect = 1e-38 Identities = 377/562 (67%), Gaps = 4/562 (1%) Strand=Plus/Minus Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479 |||||| | | ||| | || || || | ||||||||||| ||||| | ||||| |||| Sbjct 127406 TTCTTTCTGATATCTATGAAATCGAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCA 127347 Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539 || || || |||||||| || || || |||||||| ||||| || |||||||| | || Sbjct 127346 AAGGCACCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACA 127287 Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT 23599 | | ||| || | || |||||| || | || || || | | ||| | Sbjct 127286 CGAACCATAGGGATGATACCGTTAGAAGTACCATTGGTACCAGCTATGTAAGCACCAGTA 127227 Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 | |||| |||||| | || |||||||| || || | || || |||| || ||| Sbjct 127226 GAACGAATGTTGTGGATATGTAAACCTATACCACCAGCACTCTTGGAAATCAAGGCACAT 127167 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 |||| || |||||||| || || || ||| || || | || ||||||||||| Sbjct 127166 GTCTTCAAGGTATCGTAGATACCATCAATAGAGTCATCCTTCATAGCAACCAAGAAACAA 127107 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 || |||||||| | | || ||| | || |||| || || |||| || || Sbjct 127106 GACGACATTTGAGGACTAGGAGTACCAGCATTAAACAACGTTGGAGAACCGTGTGTGAAA 127047 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 ||| | ||||| | ||||||| |||||| | || ||||| | || || || Sbjct 127046 AATCTTTGGGACATCATGTTGTACGATTCGATGACTCTTTCGATGTCATTACCATGGATT 126987 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG--ACCGTGACGCCGTTAATTT 23897 |||| ||||| | ||| |||| | ||| ||||| ||| | | | | ||||| ||| Sbjct 126986 CCGACTGCGACTCTCATGATCAAATGTTGTGGTCTTTCGGCAACCTTA--CCGTTGATTC 126929 Query 23898 TGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGAT 23957 | |||| || || | || || || || ||||| ||||||| ||||| || ||||||| Sbjct 126928 TCAACAAGTAAGATCTTTCCAAGGTCTTGAATCCGAAATAGTTGTAGTTGAAATCACGAT 126869 Query 23958 CGTGCACTATGGCCGAATTCAA 23979 | ||| || || || ||||| Sbjct 126868 CAAACACAATAGCGGAGTTCAA 126847 >seq32 Length=83674 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| | || || || || || ||| | || |||||| | Sbjct 19625 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 19684 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || ||||||||||| | || || ||| Sbjct 19685 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 19744 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | |||| |||||||| || || || ||||| || || | ||||| Sbjct 19745 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 19804 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| || | || |||| | ||| | || || ||| Sbjct 19805 AACATCCAAAAGGAATCCACCTTACACTTGGTCTTAAGATTAAGAGGTGGT 19855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763391076800