Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 158 2e-33 seq163 118 2e-21 >seq2 Length=194962 Score = 158 bits (174), Expect = 2e-33 Identities = 314/462 (68%), Gaps = 11/462 (2%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| |||||||| |||||||| |||||| |||| || |||||||||||| Sbjct 12742 GTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCATTTGCTTCCATTTTCTGG 12801 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| | |||||||| | |||| ||||||||| || || | | | || Sbjct 12802 TTAAAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAATGAATTAATCTGTCGTGAT 12861 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || || || ||||| || | || | | | | | | Sbjct 12862 GAAGGTTTACACACTGATTTCGCATGTTTGTTATTCTCCCA------CTTACAAAACAGA 12915 Query 102098 TCAAGAGAAAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 || | ||| |||| |||| |||||||||| || |||||| | |||||| Sbjct 12916 CCAGATGCTGTTATTGTTGAAAGAATTATCACTGAAGCAGTTACTATTGAAAAGGAATTT 12975 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 ||| | | | || | |||| | || |||||||| || || ||| | || ||| Sbjct 12976 TTCATTGACGCTTTACCAATCTCATTATTAGGTATGAACTGTAACTTAATGTGTCAATAC 13035 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAAT-GGGACTAGAAAAGCACTATAATGT 102273 ||||||| || || |||| | ||||||||| | || | | ||||| || || || Sbjct 13036 GTTGAATTCGTTGCTGATAGATTATTGGTTGCCTTAGGTAACAAAAAAG-TTTACAACGT 13094 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 ||||||||| ||| || ||||| || |||||| | | |||||||| || || || Sbjct 13095 TACCAACCCATTCGACTTTATGGAAAACATTTCCTTAGCCGGAAAGACCAATTTCTTCGA 13154 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTC 102375 ||||||||| || || ||| ||| |||||||| || Sbjct 13155 AAAGAGAGTTAGTGACTACCAAAAGGCCGGTGTCATGGCATC 13196 >seq163 Length=21698 Score = 118 bits (130), Expect = 2e-21 Identities = 281/417 (67%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCC---AAATGAGGTTCTCTCTT 35209 |||||||||||||| || ||| ||| | |||| || | || |||| ||| |||| Sbjct 13192 GATAGAACTGGAACCGGTACTAAATCGCTCTTTGCTCCTCCACAATTGAGATTCAATCTT 13251 Query 35210 CGAGACGACACTATTCCAGTT-CTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGA 35268 ||||||||| ||||| || || ||||| ||||| |||||| ||||| | | | Sbjct 13252 TCAGACGACAC-ATTCCCTTTGCTTACTACAAAGAAGGTTTTCTCGAGAGCTATCATTCA 13310 Query 35269 AGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCC-AAGAAGAAGA 35327 || | | ||||||| | || ||| ||||| ||| ||||| | || ||| | Sbjct 13311 TGAGTTGTTGTGGTTCGTACAAGGATGTACGGACGCTAAAAAATTGTCGGAAAAAGGTGT 13370 Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387 || | | |||| || ||||| || | |||| |||||| | ||| || | || Sbjct 13371 TAAAATTTGGGAAGGC-AATGGATCAAGAGAATACTTGGACTCCATAGGATTGAAAGACC 13429 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 | ||||| |||||||| || || || || ||||||||| | |||||||| || || | Sbjct 13430 GTCGCGAGGGTGATTTGGGTCCAGTTTATGGGTTCCAATGGAGGCATTTTGGAGCAGAGT 13489 Query 35448 ATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTA- 35506 || | ||| | || || ||||| | || |||||||||| ||| || || Sbjct 13490 ATAAAGATTGTGACACAGACTACTCTGGACAAGGGGTTGATCAATTA--CAAGATGTTAT 13547 Query 35507 -AAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 || | | | | ||||||| | |||||||| || || ||| | ||||||||||| Sbjct 13548 TAAAAAGTTAAAAACAAATCCATACGATAGAAGAATTATCATGTCTGCATGGAATCC 13604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577153315700