Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq2 260 1e-64
>seq2
Length=194962
Score = 260 bits (288), Expect = 1e-64
Identities = 578/858 (67%), Gaps = 17/858 (2%)
Strand=Plus/Minus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
||||| || ||||||||||| ||||| ||||| || || || || | | || || |||
Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119
Query 13641 TCCATAAAATCAAATGGATT--TATTGACATAAACACTTTATCACAACCTAGTTCTAATA 13698
|||||||| || ||||| || || | ||||| ||| | ||||| | | |
Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAAC--TTTTTTGTTACCTAAGGCAACCA 13061
Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758
|||||||||||||| || |||| |||||| ||||||| | ||| |||||||||| ||
Sbjct 13060 ATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATA 13001
Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818
| | || | | | |||||||| ||||| |||| || || || | ||||
Sbjct 13000 ATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAA 12941
Query 13819 TAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13878
| || || ||| || | || | || || || || | ||||| || |
Sbjct 12940 TTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACATGCGA 12881
Query 13879 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13938
||||| || | || ||||| | || || | ||| || || || ||||| || ||||
Sbjct 12880 AATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCA 12821
Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998
| || |||| || |||||||| || || | ||||||||| || ||||| || || |
Sbjct 12820 TTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTT 12761
Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATT 14058
|||| ||||| || || | ||||| ||| || || | || | | | ||||||
Sbjct 12760 CAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATC 12701
Query 14059 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAAT 14118
|| |||||| |||| || || || ||| || || | || |||||||| |||||
Sbjct 12700 TTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGA 12641
Query 14119 ATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175
| || |||| |||| | | ||||| |||| || || |||||||| || ||||||
Sbjct 12640 AGTCAGCTTC-CTTTGGATCCTTGA--TGTAGGTGTCGATAAGTAACGAGTAGGTTTCAG 12584
Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235
|||| ||||||||||| || || |||||||| || || | ||||| | ||| |
Sbjct 12583 AGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAA 12524
Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295
|||| | | || |||| |||| ||||| ||||| ||||| ||| ||| ||||| |
Sbjct 12523 CTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGA 12464
Query 14296 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT---TTCCAATC-- 14350
||||||| || | ||| |||||| || | ||||| | |||| ||||| ||
Sbjct 12463 ATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCAT 12404
Query 14351 GGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14410
|| | ||| ||| | ||| | ||| || | ||||| || ||| |||| || ||
Sbjct 12403 GGGT--ATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTT 12346
Query 14411 ATACATTACCCATATTTC 14428
|||||| ||| |||||
Sbjct 12345 GTACATTTGCCAGATTTC 12328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479724761836000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |