Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2 260 1e-64 >seq2 Length=194962 Score = 260 bits (288), Expect = 1e-64 Identities = 578/858 (67%), Gaps = 17/858 (2%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || ||||||||||| ||||| ||||| || || || || | | || || ||| Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 13641 TCCATAAAATCAAATGGATT--TATTGACATAAACACTTTATCACAACCTAGTTCTAATA 13698 |||||||| || ||||| || || | ||||| ||| | ||||| | | | Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAAC--TTTTTTGTTACCTAAGGCAACCA 13061 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 |||||||||||||| || |||| |||||| ||||||| | ||| |||||||||| || Sbjct 13060 ATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATA 13001 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 | | || | | | |||||||| ||||| |||| || || || | |||| Sbjct 13000 ATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAA 12941 Query 13819 TAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13878 | || || ||| || | || | || || || || | ||||| || | Sbjct 12940 TTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACATGCGA 12881 Query 13879 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13938 ||||| || | || ||||| | || || | ||| || || || ||||| || |||| Sbjct 12880 AATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCA 12821 Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998 | || |||| || |||||||| || || | ||||||||| || ||||| || || | Sbjct 12820 TTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTT 12761 Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATT 14058 |||| ||||| || || | ||||| ||| || || | || | | | |||||| Sbjct 12760 CAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATC 12701 Query 14059 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAAT 14118 || |||||| |||| || || || ||| || || | || |||||||| ||||| Sbjct 12700 TTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGA 12641 Query 14119 ATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 | || |||| |||| | | ||||| |||| || || |||||||| || |||||| Sbjct 12640 AGTCAGCTTC-CTTTGGATCCTTGA--TGTAGGTGTCGATAAGTAACGAGTAGGTTTCAG 12584 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235 |||| ||||||||||| || || |||||||| || || | ||||| | ||| | Sbjct 12583 AGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAA 12524 Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295 |||| | | || |||| |||| ||||| ||||| ||||| ||| ||| ||||| | Sbjct 12523 CTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGA 12464 Query 14296 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT---TTCCAATC-- 14350 ||||||| || | ||| |||||| || | ||||| | |||| ||||| || Sbjct 12463 ATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCAT 12404 Query 14351 GGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14410 || | ||| ||| | ||| | ||| || | ||||| || ||| |||| || || Sbjct 12403 GGGT--ATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTT 12346 Query 14411 ATACATTACCCATATTTC 14428 |||||| ||| ||||| Sbjct 12345 GTACATTTGCCAGATTTC 12328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479724761836000