Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2 271 7e-68 >seq2 Length=194962 Score = 271 bits (300), Expect = 7e-68 Identities = 578/856 (68%), Gaps = 13/856 (2%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||||||||| ||||| || || || || || || | | || || ||| Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 |||||||| |||||||| || || | | ||||| | ||||| | | ||| Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTACCTAAGGCAACCAAT 13059 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 ||||||||||||| || |||| |||||| ||||||| | ||| |||||||||| || | Sbjct 13058 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 12999 Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608 | || | | | | |||||||| ||||| |||| || || || | ||||| Sbjct 12998 GAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAATT 12939 Query 13609 ATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 13668 | | || ||| || | || | || || || || | ||||| || ||| Sbjct 12938 CTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACATGCGAAA 12879 Query 13669 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 13728 ||| || | || ||||| | || || | ||| || || || ||||| || ||||| Sbjct 12878 TCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCATT 12819 Query 13729 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 13788 || |||| || |||||||| || || | ||| ||||| || ||||| || || ||| Sbjct 12818 AAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTTCA 12759 Query 13789 ACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTT 13848 || ||||| || || | || || ||| || || | || | | | |||||| || Sbjct 12758 ACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATCTT 12699 Query 13849 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGT 13908 |||||| |||| || || || ||| || || | ||||| ||||||||||| Sbjct 12698 AAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGAAG 12639 Query 13909 TC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 13965 || |||| |||| | | ||||| |||| || || |||||||| || |||||||| Sbjct 12638 TCAGCTTC-CTTTGGATCCTTGA--TGTAGGTGTCGATAAGTAACGAGTAGGTTTCAGAG 12582 Query 13966 TGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14025 || |||||||| || || || |||||||| ||||| | ||||||| ||| || Sbjct 12581 TGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAACT 12522 Query 14026 TCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAAT 14085 || | | || |||| |||||||||| ||||||||||| ||| ||| ||||| ||| Sbjct 12521 TCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGAAT 12462 Query 14086 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT---TTCCAATC--GG 14140 ||||| || | ||| |||||| || | ||||| | |||| ||||| || || Sbjct 12461 GCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCATGG 12402 Query 14141 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTAT 14200 | ||| ||| | ||| | ||| || | ||||| || ||| |||| || || | Sbjct 12401 GT--ATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGT 12344 Query 14201 ACATTACCCATATTTC 14216 ||||| ||| ||||| Sbjct 12343 ACATTTGCCAGATTTC 12328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585569525600