Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq2 219 4e-52
>seq2
Length=194962
Score = 219 bits (242), Expect = 4e-52
Identities = 563/847 (66%), Gaps = 19/847 (2%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || |||||||| ||||| || || || || ||||| |||| ||||| |||
Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAGT 12976
|||||||| ||||| || || | ||| | ||| |||||| ||||| | |
Sbjct 13118 TCCATAAAGTCGAATGGGTTGGT--AAC-GTTGTAAACTTTTTTGTTACCTAAGGCAACC 13062
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
|| ||||| |||||||| || || | ||| || |||||| | ||||||||| |||| |
Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GATA 13093
||| | || | ||| || | ||||| | ||||| ||| ||||||||| ||||
Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942
Query 13094 ACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACAT 13153
| | | || || || || ||| ||| || || || | || ||||
Sbjct 12941 ATTCTTTCAACAATAACAGCATC---TGGTCTGTTTTGTAAGTGGGAGAATAACAAACAT 12885
Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213
|| |||||| ||| || |||||||| | || |||| || || || || |||| |||
Sbjct 12884 GCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCA 12825
Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273
||||| | |||| || || | ||| || || | |||||| ||||| || || ||
Sbjct 12824 GGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATA 12765
Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-AT 13332
|||||||| || || || || | || |||||||| | | || | | || || ||
Sbjct 12764 CCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCA-TCACTGAT 12706
Query 13333 CCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAA 13392
||| || ||||||| || || | || | || || || || || || || ||
Sbjct 12705 CCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAA 12646
Query 13393 TAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTC 13452
||| | | |||||| || || || || || || | ||| || ||||
Sbjct 12645 TAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTC 12586
Query 13453 TGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTG 13512
|| || || ||||||||| |||||||||||||| ||||| | || |||| | ||
Sbjct 12585 AGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTG 12526
Query 13513 AACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaa 13572
|||||| | | || |||| | |||||||||||||| || |||||| |||||||||
Sbjct 12525 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAA 12466
Query 13573 aaaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTT---AACCAAT 13628
|| | |||| | || ||| || | | ||||||| | ||| ||| ||| |
Sbjct 12465 GAATGCCAAGATTCTG-GAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGT 12407
Query 13629 CTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCT 13688
| | |||||| ||||| | || || | ||||| || ||||| |||||||||
Sbjct 12406 CATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 12347
Query 13689 TATACAT 13695
| |||||
Sbjct 12346 TGTACAT 12340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430979563597080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |