Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq2 219 4e-52 >seq2 Length=194962 Score = 219 bits (242), Expect = 4e-52 Identities = 563/847 (66%), Gaps = 19/847 (2%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || |||||||| ||||| || || || || ||||| |||| ||||| ||| Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAGT 12976 |||||||| ||||| || || | ||| | ||| |||||| ||||| | | Sbjct 13118 TCCATAAAGTCGAATGGGTTGGT--AAC-GTTGTAAACTTTTTTGTTACCTAAGGCAACC 13062 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 || ||||| |||||||| || || | ||| || |||||| | ||||||||| |||| | Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GATA 13093 ||| | || | ||| || | ||||| | ||||| ||| ||||||||| |||| Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942 Query 13094 ACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACAT 13153 | | | || || || || ||| ||| || || || | || |||| Sbjct 12941 ATTCTTTCAACAATAACAGCATC---TGGTCTGTTTTGTAAGTGGGAGAATAACAAACAT 12885 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 || |||||| ||| || |||||||| | || |||| || || || || |||| ||| Sbjct 12884 GCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCA 12825 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | |||| || || | ||| || || | |||||| ||||| || || || Sbjct 12824 GGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATA 12765 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-AT 13332 |||||||| || || || || | || |||||||| | | || | | || || || Sbjct 12764 CCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCA-TCACTGAT 12706 Query 13333 CCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAA 13392 ||| || ||||||| || || | || | || || || || || || || || Sbjct 12705 CCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAA 12646 Query 13393 TAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTC 13452 ||| | | |||||| || || || || || || | ||| || |||| Sbjct 12645 TAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTC 12586 Query 13453 TGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTG 13512 || || || ||||||||| |||||||||||||| ||||| | || |||| | || Sbjct 12585 AGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTG 12526 Query 13513 AACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaa 13572 |||||| | | || |||| | |||||||||||||| || |||||| ||||||||| Sbjct 12525 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAA 12466 Query 13573 aaaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTT---AACCAAT 13628 || | |||| | || ||| || | | ||||||| | ||| ||| ||| | Sbjct 12465 GAATGCCAAGATTCTG-GAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGT 12407 Query 13629 CTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCT 13688 | | |||||| ||||| | || || | ||||| || ||||| ||||||||| Sbjct 12406 CATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 12347 Query 13689 TATACAT 13695 | ||||| Sbjct 12346 TGTACAT 12340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430979563597080