Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2 197 3e-45
seq32 132 1e-25
>seq2
Length=194962
Score = 197 bits (218), Expect = 3e-45
Identities = 580/876 (66%), Gaps = 51/876 (6%)
Strand=Plus/Plus
Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801
|||||||| |||| | ||||| || ||||||| |||||| | ||| || | | ||
Sbjct 12340 ATGTACAAGAAGGCTGAAGCTTCCTTCTGGACTGCCGAAGAAATTGATTTGGGTAAAGA- 12398
Query 268802 TTA---ATAGATTGGAA----AAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATAT 268854
|| || || ||||| ||||| || | || | |||||| || || || | |
Sbjct 12399 -TACCCAT-GACTGGAACGAAAAATTGAACAACA-ACGAAAGATACTTCATTTCC-AGAA 12454
Query 268855 TCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913
||||| | || ||||| | | ||| ||||| ||||||||||| | || || || ||||
Sbjct 12455 TCTTGGCATTCTTTGCTGCTTCTGACGGTATTGTTAACGAAAACTTGGTTGAAAACTTCT 12514
Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973
| || || || ||||| ||||||| ||||| || || ||||| || || ||||
Sbjct 12515 CTGCTGAAGTTCAAATTCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATTATGATGGAAA 12574
Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033
| || || || || | ||| || | || || || || || | ||| | |||
Sbjct 12575 ACATCCACTCTGAAACCTACTCGTTACTTATCGACACCTACATCAAGGAT-----CCAAA 12629
Query 269034 AGAAAA-GACTATTTTCTTCTATGAGAACTATGGAC---------TGTGTGAGaaaaaaa 269083
||| |||| | || ||| ||| |||| ||| ||| | | || ||
Sbjct 12630 GGAAGCTGACT-TCTTATTCAATG----CTATCGACAACATCCCTTGTATCAAGAAGAAG 12684
Query 269084 TCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTT 269140
|||| |||||| | | |||||| | ||| | || ||| ||| ||||| ||||||
Sbjct 12685 GCTGACTGGGCTTTAAGATGGATCAGTGATGATGATGCTTTATTCGGTGAAAGATTAGTT 12744
Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200
|| || || ||||| |||||||| ||||| || || ||||| | || || |||||
Sbjct 12745 GCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCATTTGCTTCCATTTTCTGGTTA 12804
Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260
||||| ||||| | ||||| || ||||| ||||| || ||||| || | | || |||
Sbjct 12805 AAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAATGAATTAATCTGTCGTGATGAA 12864
Query 269261 GGTTTACACTGCGACTTCGCTTGTTTATTATT-TACTAATTATCTTTCACACAAACCTTC 269319
||||||||| || ||||| ||||| ||||| | | | ||| | ||| |||
Sbjct 12865 GGTTTACACACTGATTTCGCATGTTTGTTATTCTCCCACTTA----CAAAACAGACCAGA 12920
Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379
| | || || | |||||| | ||| ||| || | |||| |||||| | |
Sbjct 12921 TGCTGTTATTGTTGAAAGAATTATCACTGAAGCAGTTACTATTGAAAAGGAATTTTTCAT 12980
Query 269380 GGAAGCTCTATCTATCGATC-TTA-TCGGTATGAATAGCAAATCGATGATAGAATATATT 269437
|| ||| || | ||| || ||| | |||||||| | || | ||| |||| ||
Sbjct 12981 TGACGCTTTACCAATC--TCATTATTAGGTATGAACTGTAACTTAATGTGTCAATACGTT 13038
Query 269438 AAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTT 269494
| ||||| |||||||||| |||| | ||||| || |||||| || ||||||
Sbjct 13039 GAATTCGTTGCTGATAGATTATTGGTTGCCTTAGG---TAACAAAAAAGTTTACAACGTT 13095
Query 269495 GAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAG 269554
|| || || |||||||| || || || |||| || ||| | |||||||||||
Sbjct 13096 ACCAACCCATTCGACTTTATGGAAAACATTTCCTTAGCCGGAAAGACCAATTTCTTCGAA 13155
Query 269555 AAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590
||| | || ||| |||| || || ||||| |||
Sbjct 13156 AAGAGAGTTAGTGACTACCAAAAGGCCGGTGTCATG 13191
>seq32
Length=83674
Score = 132 bits (146), Expect = 1e-25
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | || | ||||| || ||||| || || || || || ||||||
Sbjct 19854 CCACCTCTTAATCTTAAGACCAAGTGTAAGGTGGATTCCTTTTGGATGTTGTAATCAGAT 19795
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||| ||||||| ||| || ||||| || |||| || ||||| ||||| ||
Sbjct 19794 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGA 19735
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || ||||| | || || || || | || || || ||| ||
Sbjct 19734 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACT 19675
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||| ||||| ||||||||||| | || || || || || |||||||||
Sbjct 19674 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 19624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151390433762320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |