Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2 197 3e-45 seq32 132 1e-25 >seq2 Length=194962 Score = 197 bits (218), Expect = 3e-45 Identities = 580/876 (66%), Gaps = 51/876 (6%) Strand=Plus/Plus Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801 |||||||| |||| | ||||| || ||||||| |||||| | ||| || | | || Sbjct 12340 ATGTACAAGAAGGCTGAAGCTTCCTTCTGGACTGCCGAAGAAATTGATTTGGGTAAAGA- 12398 Query 268802 TTA---ATAGATTGGAA----AAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATAT 268854 || || || ||||| ||||| || | || | |||||| || || || | | Sbjct 12399 -TACCCAT-GACTGGAACGAAAAATTGAACAACA-ACGAAAGATACTTCATTTCC-AGAA 12454 Query 268855 TCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913 ||||| | || ||||| | | ||| ||||| ||||||||||| | || || || |||| Sbjct 12455 TCTTGGCATTCTTTGCTGCTTCTGACGGTATTGTTAACGAAAACTTGGTTGAAAACTTCT 12514 Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973 | || || || ||||| ||||||| ||||| || || ||||| || || |||| Sbjct 12515 CTGCTGAAGTTCAAATTCCAGAAGCCAAGTGTTTCTATGGTTTCCAAATTATGATGGAAA 12574 Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033 | || || || || | ||| || | || || || || || | ||| | ||| Sbjct 12575 ACATCCACTCTGAAACCTACTCGTTACTTATCGACACCTACATCAAGGAT-----CCAAA 12629 Query 269034 AGAAAA-GACTATTTTCTTCTATGAGAACTATGGAC---------TGTGTGAGaaaaaaa 269083 ||| |||| | || ||| ||| |||| ||| ||| | | || || Sbjct 12630 GGAAGCTGACT-TCTTATTCAATG----CTATCGACAACATCCCTTGTATCAAGAAGAAG 12684 Query 269084 TCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTT 269140 |||| |||||| | | |||||| | ||| | || ||| ||| ||||| |||||| Sbjct 12685 GCTGACTGGGCTTTAAGATGGATCAGTGATGATGATGCTTTATTCGGTGAAAGATTAGTT 12744 Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200 || || || ||||| |||||||| ||||| || || ||||| | || || ||||| Sbjct 12745 GCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCATTTGCTTCCATTTTCTGGTTA 12804 Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260 ||||| ||||| | ||||| || ||||| ||||| || ||||| || | | || ||| Sbjct 12805 AAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAATGAATTAATCTGTCGTGATGAA 12864 Query 269261 GGTTTACACTGCGACTTCGCTTGTTTATTATT-TACTAATTATCTTTCACACAAACCTTC 269319 ||||||||| || ||||| ||||| ||||| | | | ||| | ||| ||| Sbjct 12865 GGTTTACACACTGATTTCGCATGTTTGTTATTCTCCCACTTA----CAAAACAGACCAGA 12920 Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379 | | || || | |||||| | ||| ||| || | |||| |||||| | | Sbjct 12921 TGCTGTTATTGTTGAAAGAATTATCACTGAAGCAGTTACTATTGAAAAGGAATTTTTCAT 12980 Query 269380 GGAAGCTCTATCTATCGATC-TTA-TCGGTATGAATAGCAAATCGATGATAGAATATATT 269437 || ||| || | ||| || ||| | |||||||| | || | ||| |||| || Sbjct 12981 TGACGCTTTACCAATC--TCATTATTAGGTATGAACTGTAACTTAATGTGTCAATACGTT 13038 Query 269438 AAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTT 269494 | ||||| |||||||||| |||| | ||||| || |||||| || |||||| Sbjct 13039 GAATTCGTTGCTGATAGATTATTGGTTGCCTTAGG---TAACAAAAAAGTTTACAACGTT 13095 Query 269495 GAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAG 269554 || || || |||||||| || || || |||| || ||| | ||||||||||| Sbjct 13096 ACCAACCCATTCGACTTTATGGAAAACATTTCCTTAGCCGGAAAGACCAATTTCTTCGAA 13155 Query 269555 AAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590 ||| | || ||| |||| || || ||||| ||| Sbjct 13156 AAGAGAGTTAGTGACTACCAAAAGGCCGGTGTCATG 13191 >seq32 Length=83674 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | || | ||||| || ||||| || || || || || |||||| Sbjct 19854 CCACCTCTTAATCTTAAGACCAAGTGTAAGGTGGATTCCTTTTGGATGTTGTAATCAGAT 19795 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||||| ||||||| ||| || ||||| || |||| || ||||| ||||| || Sbjct 19794 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGA 19735 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || || ||||| | || || || || | || || || ||| || Sbjct 19734 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACT 19675 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 |||| ||||| ||||||||||| | || || || || || ||||||||| Sbjct 19674 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 19624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390433762320