Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq163 167 3e-36 >seq163 Length=21698 Score = 167 bits (184), Expect = 3e-36 Identities = 323/470 (69%), Gaps = 15/470 (3%) Strand=Plus/Minus Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTC 7068 || ||||| || |||||||| || || || || | || | | | ||| | |||||| Sbjct 13658 TAGAATTGGCAGAATACATGGCACGGGGGCAAGGCCATCTTAGCAAAATCTGGCGGATTC 13599 Query 7069 CAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATT 7128 || |||| ||| | ||| | |||||| | ||||||||||||||| ||| | |||| | Sbjct 13598 CATGCAGACATGATAATTCTTCTATCGTATGGATTTGTTTTTAACTTTTTAATAACATCT 13539 Query 7129 TGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCA 7188 ||||||||||| | || || || || | || | ||||| | |||| | |||||| Sbjct 13538 TGTAATTGATCAACCCCTTGTCCAGAGTAGTCTGTGTCACAATCTTTATACTCTGCTCCA 13479 Query 7189 AAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAAT 7248 ||||| |||||||| |||||||||| ||||| |||||||| || ||| | || ||| Sbjct 13478 AAATGCCTCCATTGGAACCCATAAACTGGACCCAAATCACCCTCGCGACGGTCTTTCAAT 13419 Query 7249 CCTAATCGATTTAAATTA-GATTTTGATCCATAAGCATCCCAAATATGTACAGAtttttt 7307 ||| || || | || || | ||||||||| | |||||||| | ||| ||||| Sbjct 13418 CCT-ATGGAGTCCAAGTATTCTCTTGATCCATTGCCTTCCCAAATTTTAACACCTTTTTC 13360 Query 7308 tGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTT--CTACTATT 7365 || || ||| || | ||| |||||| | |||||| || | || | | || Sbjct 13359 CGACAATTTTTTAGCGTCCGTACATCCTTGTACGAACCACAACAACTCATGAATGATAGC 13300 Query 7366 CCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGT----ACTTAAA----TCAT 7417 | || ||||| ||| |||||||| | ||||||||||| || ||| || Sbjct 13299 TCTCGAGAAAACCTTC--TTTGTAGTAAGCAAAGGGAATGTGTCGTCTGAAAGATTGAAT 13242 Query 7418 ATCTATTCTGTA-AACCAAATACTGAAAGAGTACCTGTTCCAGTTCTATC 7466 || ||| || | | |||| | || |||||| |||||||||||||| Sbjct 13241 CTCAATTGTGGAGGAGCAAAGAGCGATTTAGTACCGGTTCCAGTTCTATC 13192 Score = 82.4 bits (90), Expect = 9e-11 Identities = 179/263 (68%), Gaps = 15/263 (6%) Strand=Plus/Minus Query 6714 ATCTAACAATT-CAAAATCTTCAAATTTAAAATCAC--ATAAATTA---TCAGACttttt 6767 ||| ||| ||| ||||||||||||| ||||||||| ||| ||| | | ||||| Sbjct 14020 ATCCAACTATTTCAAAATCTTCAAACTTAAAATCATCAATAGATTTGATTTCGTCTTTTC 13961 Query 6768 tttt-------AATATTACAACAGGTGAAGGTTTTATT-GATCGAGTTAATTGTTCTTTT 6819 ||| | ||||| ||| ||| |||| | || || ||||||||||| Sbjct 13960 TTTCTTCCTTGATTATTAACTTAGG-GAATTCTTTAGGAGTTCTAGCCAATTGTTCTTTC 13902 Query 6820 ATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCT 6879 | || | | ||| || ||||| | ||||||||| |||| ||||| ||||| || || Sbjct 13901 AATGCATCAACATGGTCCAAATACACATGAGCATCACCTAATGTATGGATAAACTCGCCA 13842 Query 6880 GGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTA 6939 | ||| || ||| || || || | | |||||||| ||||| ||||| | || Sbjct 13841 CAATCCATGTCTACAATATGTGCTATCATTTTCGTTAATAACGCATATGAAGCAATGTTG 13782 Query 6940 AAAGGTACACCTAATCCCATATC 6962 || || |||||||| ||||| || Sbjct 13781 AATGGGACACCTAACCCCATGTC 13759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595867977864000