Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2 253 2e-62 >seq2 Length=194962 Score = 253 bits (280), Expect = 2e-62 Identities = 590/881 (67%), Gaps = 23/881 (3%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| || ||||||||||| |||||||| ||||| |||||||| | || || || | Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 21245 TCCATAAAATCAAATGGATTTTCA--GATTTAAA-TATTTTATTACAACCCAGTTCTGAT 21301 |||||||| || ||||| || | | | |||| | |||| |||| | | | Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTAC---CTAAGGCAACC 13062 Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361 ||||||||||| || || ||||| | |||||||||||||| | ||| |||||||| | Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002 Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCA---ACA 21418 ||| | || | ||| | | ||||| ||||| |||| || |||||| | | Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942 Query 21419 ATTATATTTATTATCCTAG-ATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACA 21477 ||| | | | || || || | | | | ||| || || | |||||| Sbjct 12941 ATTCTTTCAACAATAACAGCATCTGGTCTG----TTTTGTAAGTGGGAGAATAACAAACA 12886 Query 21478 TGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACC 21537 ||| |||||| || ||||||||||| | || ||||||||||| || || |||||||| Sbjct 12885 TGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACC 12826 Query 21538 GGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAAT 21597 |||||||| |||||||| |||||||| || || || ||||||| || ||||| || Sbjct 12825 AGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGAT 12766 Query 21598 GCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATAT 21657 || ||||| ||||| || |||||||||| ||||||| || || || | ||| || Sbjct 12765 ACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGAT 12706 Query 21658 CCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 |||| || ||||| | ||||| | || |||||| || | || ||||| || || Sbjct 12705 CCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAA 12646 Query 21718 -AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA-TACATT 21775 |||| | | ||| | | ||| | ||| || | || || Sbjct 12645 TAAGAAG-TCAGCTTCCTTTGGATCCTTGATG-TAGGTGTCGATAAGTAACGAGTAGGTT 12588 Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835 ||||| || || ||||| ||| || || || || || ||||| | || |||| | | Sbjct 12587 TCAGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATT 12528 Query 21836 TGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895 ||||| || | | | || || | |||||||||| || || || || ||| || ||| Sbjct 12527 TGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCA 12468 Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTT-AATTTT---TTCCA 21951 || |||||||| || | || || |||| |||||| | |||| |||||| ||||| Sbjct 12467 AAGAATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGT-TGTTCAATTTTTCGTTCCA 12409 Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTT 22011 || |||||| ||||| | |||||| | ||||| ||| ||| |||||| Sbjct 12408 GTCATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTT 12349 Query 22012 TTTATACATAATCCAGATATCATTATATATTATTGGAAATA 22052 || ||||| |||||| || | || | ||||| |||| Sbjct 12348 CTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAATA 12308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531897209669600