Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 232 7e-56 >seq2 Length=194962 Score = 232 bits (256), Expect = 7e-56 Identities = 617/930 (66%), Gaps = 21/930 (2%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||||| || | |||| | ||||| |||||||| |||||||| | Sbjct 13191 CATGACACCGGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGC 13132 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGA 92906 || || || | ||| || || || ||| || | |||| ||| |||||| | Sbjct 13131 TAAGGAAAT-GTTTTCCATAAAGTCGAATGGGTTGGTAACGTTGTAA-ACTTTTTTGTTA 13074 Query 92907 TC-AACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAA 92965 | || | ||||||||||||||| || ||||| | ||| ||| |||| || | ||| Sbjct 13073 CCTAAGGCAACCAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAG 13014 Query 92966 TTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACG 93025 ||||| |||| | | |||| |||||| | || || || || || || ||| Sbjct 13013 TTCATACCTAATAATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACT 12954 Query 93026 GCTTCTTTCAAGATTTCTATTACTCTACTA---TTTGGTGGTTTTTGTACGACATAATTG 93082 ||||| | | ||| | || || | | |||| ||||||| | | | Sbjct 12953 GCTTCAGTGATAATTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGA---G 12897 Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142 | | || || || || || || ||||||||||| || || | || || |||||| | Sbjct 12896 AATAACAAACATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAG 12837 Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 || |||||||| || | | |||| ||||| | ||| || || |||||||| |||| Sbjct 12836 AAGGTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCA 12777 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA 93262 || || |||||||| || || || || || || | | ||| | || || | Sbjct 12776 CTGAAGAAGATACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCA 12717 Query 93263 TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TC 93321 | | ||||||||| |||||||||| || || || ||||| |||||||| | |||| || Sbjct 12716 TCATCACTGATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGA-TGTTGTC 12658 Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381 |||||| || |||| | | || || | | ||| ||||| || ||||| | | Sbjct 12657 GATAGCATTGAATAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCGATAAGTAA 12598 Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441 || || ||||||| |||| || ||||| ||||||||| || |||||||| | || Sbjct 12597 CGAGTAGGTTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGC 12538 Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 ||| | || || ||||| ||| || | || || | ||||| || || ||||| || Sbjct 12537 TTCTGGAATTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTC 12478 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561 || || ||||| || ||||| || || || | | | || | | || | || Sbjct 12477 AGAAGCAGCAAAGAATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTT 12418 Query 93562 ATC---CCAATC--GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 || ||| || || | |||||| | ||| | ||||||| ||||||| || || Sbjct 12417 TTCGTTCCAGTCATGGGT--ATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAA 12360 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAA 93676 ||||| || || |||||||| | ||| || || || || | ||||| |||| || ||| Sbjct 12359 GCTTCAGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAATAAAACGAAA 12300 Query 93677 CGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 ||| | ||| || ||| ||| || ||| Sbjct 12299 CGACGGGTGTTTTCGATTAATAATGGTTCT 12270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857041189600